Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1510 ATGGACGTTTATTTCCAAAACCCTAACCCATTTTCTGGAGTTGATAATATACCCCCTCCTCTTTCCTCTGATTTCATTAACGTATCTGATTATCTAGTTCTTGATGATGATGTTGTTGCTAATCCAAACTCTAATTGGTCACTAAGTTCAGAAACTCCTGAATCATCGGATAAAGCAGGTTCCATCAATGATATTAATGTCATTAATCAAGGGTTTAGTGATGAGATTGAAACCTCTATCAACAACAACAGCAACAATAACATGAACATAAAACGCAAAAGTAGAGGGATGAATGAAACTACAGTGGAAGTGACTCCAAGGGTTACGTTTAGAACGAGATCGCAGTTTGAGATTATGGATGACGGATACAAATGGAGGAAGTATGGAAAGAAGTTTGTGAAAAATAACTCCAACCCAAGGAATTACTATAAGTGTTCATGTGAAGGATGTGGTGTGAAGAAGAGGGTGGAAAGGGATAGGGAAGATACAAGGTATGTGTTGACGAGTTATGATGGTGTCCACAATCACGAGAGCCCCTGTACTTTGTCGTACTACGCTCCACCAACAATGTCTTTGGTGTATTCCAATGAATGGCAACTGCAGCAGCAGGCTTCTGCAAACTCATCATCTTCTAATTATTCAACTAATACTAATTAG 657 0.3881 MDVYFQNPNPFSGVDNIPPPLSSDFINVSDYLVLDDDVVANPNSNWSLSSETPESSDKAGSINDINVINQGFSDEIETSINNNSNNNMNIKRKSRGMNETTVEVTPRVTFRTRSQFEIMDDGYKWRKYGKKFVKNNSNPRNYYKCSCEGCGVKKRVERDREDTRYVLTSYDGVHNHESPCTLSYYAPPTMSLVYSNEWQLQQQASANSSSSNYSTNTN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1510 218 Pfam WRKY DNA -binding domain 120 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g1510 218 ProSiteProfiles WRKY domain profile. 114 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g1510 218 SUPERFAMILY WRKY DNA-binding domain 111 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g1510 218 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 183 IPR044810 GO:0003700
Psa5g1510 218 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 23 183 - -
Psa5g1510 218 Gene3D WRKY domain 106 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g1510 218 SMART WRKY_cls 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1510 Psa-Chr5 115875633 115877704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1510 95 196 WRKY Transcription Factor Family AT5G64810 60.577 4.14e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa5g1510 WRKY 1.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1510 - - vun:114162658 193.356