Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1484 ATGGCTGCAATGAACTCAAGTGTATTGGCTTGTAGCTATGTCAAGTCTGGTTCTGACCTCAACGCAAAGCTCATCTCCATGCCCTCTGTTGCATCGCCAGTCGGAGTCTCAGGCTCCAAATTGCCATCCATCAAGGCCCAGCAAGCCAGAACCCCCAAAGCCAACCCATCAGATGGAAGAAGAAATGCCCTTGCCTTATTAGCAGCTACTCTTTTTACCACTGCTGTTTCTGCCTCCGACTCTTCTGCTAATGCTAGTGTATTTGATGCATACCTCGAAAAGAGCAAGGCCAACAAGGAATTGAACGACAAGAAAAGGTTAGCTACTAGTGGAGCAAACTTTGCAAGAGCATATACAGTGCAATTTGGTACATGCAAGTTCCCCGAGAATTTCACTGGTTGCCAAGATCTTGCGAAACAGAAGAAAGTACCATTCATTTCTGAAGATTTGGAACTTGAATGCGAAGGAAAAGACAAATTCAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 513 0.4464 MAAMNSSVLACSYVKSGSDLNAKLISMPSVASPVGVSGSKLPSIKAQQARTPKANPSDGRRNALALLAATLFTTAVSASDSSANASVFDAYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLELECEGKDKFKCGSNVFWKW* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1484 170 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 42 170 IPR008796 GO:0009522|GO:0015979
Psa5g1484 170 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 170 IPR008796 GO:0009522|GO:0015979
Psa5g1484 170 Gene3D - 86 170 IPR044907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1484 1 141 Calmodulin-binding Proteins AT5G64040 63.946 1.35e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1484 K02701 - tcc:18611871 243.817