Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1457 ATGCCCACGTGGTGGGGTAAAAAATCAACCAAGACCAAGGAGCTTCTTCACCAGGAAGAGCCACGTGGCGGAAGCAGTAGTGGTGGAAGTAGCGGTGGCGGCGCCGGCGTGCTTCATTTCAATTTCAATAAGTCTCCGATTAGAAACGCTACCAATTATAAAAACGGTTATTATAAACCCGAAAACCCTAGAAGTTTCGAAGATGCTTCTAATTTTAGAAATTCTCCCAGATCTAGTAGAGATTTCACTCCTTCAACCACCACCACCGCCACCGCCTCTTCTTCCTTTTGGGATTCCGATGCCGGTGATAAGATAGGCCTTCCTCTTCCTCGTCCTTCTGTTTCTTCTACCCAAAGCTTGAGCAATGATCAGGGAATTACTTTTGGATCTGCTTCTGTTTCTGGTTCTAGCGTTAGCTCCAATGGCTCTTGTGATGATCCTTCAGCTTTTAACTCTCAGATTAATAGCGTTAGGGGACAATGTGAAGCAAAGTTCAATGTGAGGTCTAAAAGCCCCGGTCCTGGGTCAAGAGGACCTACCAGCCCAACATCGCCACTTCATCCAAGGTTGCATGTTTTGAGTCTTGACTCACCTACAGGAAGGCAAGAAGATGGAAGGAGCGAGTGTCATCCATTACCTCTCCCTCCAGGATCCCCGACTAGTCCATCTTCAGCTCTTCCCAGCAACACGAGACCAAATGGAGTGGCAGAAAATTGTAGCACTAACCGTGGCAGGTGGAAGAAAGGAAAGCTTCTAGGTCGGGGAACATTTGGGCATGTTTACCTGGGATTCAATAGTGAAAGTGGACAATTGTGTGCAATAAAAGAAGTCAGGGCTGTTTGTGATGATCAAACCTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATAGATTTGCTGAGTCGGCTTTCACATCCAAACATTGTTCAATACTATGGAAGTGATTTGGGAGAAGAAACACTTTCCGTTTATTTGGAATACGTGTCTGGAGGTTCTATTCATAAATTACTTCAGGAATATGGGTCCTTCAAGGAGCCTGTTATCCAAAATTATACAAGGCAGATTGTCTCTGGACTTTCATATCTTCATGGGAGAAATACAGTGCATAGGGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGCTTGCGGACTTTGGAATGGCAAAACATATAAATTCTTCATCCTCAATGCTTTCTTTCAAAGGAAGTCCACATTGGATGGCGCCAGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAGTCAGTATGAAGGGGTAGCTGCAATATTTAAAATTGGCAACAGCAAAGACATGCCTGAAATTCCTGATCATCTCTCAAATGATGCAAAGAATTTCATTAAGCTATGCTTGCATAGAGATCCTGCAACTCGCCCTACAGCCCATATGTTACTTAATCACCCCTTTATTCGAGATCAGTCAGCAACAAAAGCTGCAAATGTCAGAATAACCAAGGATGCTTTTCCCTACATGTTCGATGGAAGCCGGACACCGCCAGCTTCAGATCTCCATTCCAATAGAACTTGTATTGCTTCTCATGATGCAGAATATGTAACAAAACCAGTTGTTGCAGCTTCCCGAGCAATAAGGAACCCAAGAGACAACACAAGAATGATCACATCTTTACCAGTATCTCCGTGTTCAAGTCCATTGCGACAGTCTGGTCCGGCACACAAGAGCTGTTTCCTTTCTCCTCCACATCCAACTTATTCACTGATGGGACATAATACCCTTGCTTCATATGAATCATATCCAATGAGATCAAATGCCAAGTTTACTCTTGATCCTTGGCATGAAATACCTATGTACAAAGCCCATACACCTGGTGGATCCCCAAGGAGACTCATTTGA 1947 0.4371 MPTWWGKKSTKTKELLHQEEPRGGSSSGGSSGGGAGVLHFNFNKSPIRNATNYKNGYYKPENPRSFEDASNFRNSPRSSRDFTPSTTTTATASSSFWDSDAGDKIGLPLPRPSVSSTQSLSNDQGITFGSASVSGSSVSSNGSCDDPSAFNSQINSVRGQCEAKFNVRSKSPGPGSRGPTSPTSPLHPRLHVLSLDSPTGRQEDGRSECHPLPLPPGSPTSPSSALPSNTRPNGVAENCSTNRGRWKKGKLLGRGTFGHVYLGFNSESGQLCAIKEVRAVCDDQTSKECLKQLNQEIDLLSRLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPHWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPDHLSNDAKNFIKLCLHRDPATRPTAHMLLNHPFIRDQSATKAANVRITKDAFPYMFDGSRTPPASDLHSNRTCIASHDAEYVTKPVVAASRAIRNPRDNTRMITSLPVSPCSSPLRQSGPAHKSCFLSPPHPTYSLMGHNTLASYESYPMRSNAKFTLDPWHEIPMYKAHTPGGSPRRLI* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1457 648 Pfam Protein kinase domain 247 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1457 648 MobiDBLite consensus disorder prediction 51 121 - -
Psa5g1457 648 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 631 - -
Psa5g1457 648 PANTHER MAP KINASE KINASE KINASE 1 631 - -
Psa5g1457 648 Gene3D Transferase(Phosphotransferase) domain 1 243 524 - -
Psa5g1457 648 SUPERFAMILY Protein kinase-like (PK-like) 243 575 IPR011009 -
Psa5g1457 648 ProSiteProfiles Protein kinase domain profile. 246 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1457 648 MobiDBLite consensus disorder prediction 166 240 - -
Psa5g1457 648 MobiDBLite consensus disorder prediction 223 240 - -
Psa5g1457 648 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Psa5g1457 648 MobiDBLite consensus disorder prediction 67 98 - -
Psa5g1457 648 SMART serkin_6 246 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1457 648 CDD STKc_MEKK1_plant 245 502 - -
Psa5g1457 648 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1457 Psa-Chr5 112333843 112340430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1457 1 565 MAP Kinase Kinase Kinase AT1G53570 57.539 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa5g1457 Pkinase 5.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1457 K04421 - gmx:100813122 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1457 5 112333843 112340430 Psa5g1457 5 112333843 112340430 ECH