Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1447 ATGTCAGAGCAAGAGCGGTTGACTAAAGATTTTTGGAGAGAAGCAAAGGTTCTATCAACTCTTCACCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCCAGATGGCCCAGGTGGAACATTGTCAACTGTAACAGAATACATGTTGCACGGATCACTGAGAAATGTTCTCTTGAAGAAGGAGAGAGTGCTTGACCGTCGTAAAAGGATCATGATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTAAAAAGTATTGTTCATTTTGATTTGAAGTGTGATAATCTGCTTGTCAACTTGGGTGATCCTGAGCGGCCTGTATGTAAGGTTGGAGATTTTGGGCTATCGAGAATTAAACGCAACACACTTGTTTCTGGTGGTGTCAGAGGGACTCTTCCATGGATGGCACCGGGACTACTGGATGGTAACAGCATTAGAGTATCTGAGAAGGTCGATATTTTCTCATTTGGTATCACAATGTGGGAAATCTTAACTGGGGAAGAACCTTATGCTAACATGCACTGTGGTGCTATCTTAGGAGGTATTGCCAATAATACGCTGAGGCCATCTATTCCAAAACGTTGTGATTCTGAGTGGAAAAAGTTGATAAAAAAATGTTGGAGCCCTGAACCTGAGGCCAGGCCAACCTTCACAGAAGTTAAAAATAGACTCCGCAACATGTCAGCTGCACTGCAGAAAAGGAGACCTAATGTTGGGATTCGTAAACCATTGATATGGAATTCCCGTGTCAAGATAGCTTTGGGAACTGCACGCGCTTTAGAGTACCTGCATGAAGTTTGTTCTCCATCAGTTGTGCATAAGAATATTAAATCAGCCAATATATTACTTGATGCAGAGCTTAATCCTCATCTTTCAGACTGTGGATTGGCAAGCTATATTCCAAATGCAGAGCAGATACTGAACCATAATGTTGGATCTGGATATGATGCCCCTGAAGTTGCATTGTCTGGAATAAGCAAACATGATTTTACCACCAAGCAGCAGCAACAGCCTGCAAAACCAGTTGAAACAACACCATGGATAGTGAATTGA 1059 0.4221 MSEQERLTKDFWREAKVLSTLHHPNVVAFYGVVPDGPGGTLSTVTEYMLHGSLRNVLLKKERVLDRRKRIMIAMDAAFGMEYLHLKSIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPGLLDGNSIRVSEKVDIFSFGITMWEILTGEEPYANMHCGAILGGIANNTLRPSIPKRCDSEWKKLIKKCWSPEPEARPTFTEVKNRLRNMSAALQKRRPNVGIRKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDCGLASYIPNAEQILNHNVGSGYDAPEVALSGISKHDFTTKQQQQPAKPVETTPWIVN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1447 352 MobiDBLite consensus disorder prediction 332 352 - -
Psa5g1447 352 Gene3D Transferase(Phosphotransferase) domain 1 237 336 - -
Psa5g1447 352 SUPERFAMILY Protein kinase-like (PK-like) 244 328 IPR011009 -
Psa5g1447 352 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1447 352 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 2 239 - -
Psa5g1447 352 Gene3D Transferase(Phosphotransferase) domain 1 53 236 - -
Psa5g1447 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
Psa5g1447 352 Gene3D Phosphorylase Kinase; domain 1 1 52 - -
Psa5g1447 352 Pfam Protein tyrosine and serine/threonine kinase 4 226 IPR001245 GO:0004672|GO:0006468
Psa5g1447 352 CDD STKc_MAP3K-like 2 226 - -
Psa5g1447 352 PANTHER SERINE-THREONINE PROTEIN KINASE 2 239 - -
Psa5g1447 352 PRINTS Tyrosine kinase catalytic domain signature 45 58 IPR001245 GO:0004672|GO:0006468
Psa5g1447 352 PRINTS Tyrosine kinase catalytic domain signature 82 100 IPR001245 GO:0004672|GO:0006468
Psa5g1447 352 PRINTS Tyrosine kinase catalytic domain signature 153 175 IPR001245 GO:0004672|GO:0006468
Psa5g1447 352 PRINTS Tyrosine kinase catalytic domain signature 197 219 IPR001245 GO:0004672|GO:0006468
Psa5g1447 352 SMART serkin_6 6 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1447 352 SUPERFAMILY Protein kinase-like (PK-like) 5 226 IPR011009 -
Psa5g1447 352 Pfam Protein kinase domain 253 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1447 Psa-Chr5 111681722 111683014 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1447 2 232 MAP Kinase Kinase Kinase AT1G16270 77.056 6.62e-129 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Psa5g1447 PK_Tyr_Ser-Thr 1.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1447 - - aprc:113872358 457.603