Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1445 ATGTCAGAGCAAGAGCGGTTGACTAAAGATTTTTGGAGAGAAGCAAAGGTTCTATCAACTCTTCACCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCCAGATGGCCCAGGTGGAACATTGTCAACTGTAACAGAATACATGTTGCACGGATCACTGAGAAATGTTCTCTTGAAGAAGGAGAGAGTGCTTGACCGTCGTAAAAGGATCATGATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTAAAAAGTATTGTTCATTTTGATTTGAAGTGTGATAATCTGCTTGTCAACTTGGGTGATCCTGAGCGGCCTGTATGTAAGGTTGGAGATTTTGGGCTATCGAGAATTAAACGCAACACACTTGTTTCTGGTGGTGTCAGAGGGACTCTTCCATGGATGGCACCGGGACTACTGGATGGTAACAGCATTAGAGTATCTGAGAAGGTCGATATTTTCTCATTTGGTATCACAATGTGGGAAATCTTGACTGGGGAAGAACCTTATGCTAACATGCACTGTGGTGCTATCATAGGAGGTATTGTCAATAATACGCTGAGGCCATCTATTCCAAAACGTTGTGATTCTGAGTGGAAAAAGTTGATAAAAAAATGTTAG 627 0.4179 MSEQERLTKDFWREAKVLSTLHHPNVVAFYGVVPDGPGGTLSTVTEYMLHGSLRNVLLKKERVLDRRKRIMIAMDAAFGMEYLHLKSIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPGLLDGNSIRVSEKVDIFSFGITMWEILTGEEPYANMHCGAIIGGIVNNTLRPSIPKRCDSEWKKLIKKC* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1445 208 SUPERFAMILY Protein kinase-like (PK-like) 5 208 IPR011009 -
Psa5g1445 208 PRINTS Tyrosine kinase catalytic domain signature 45 58 IPR001245 GO:0004672|GO:0006468
Psa5g1445 208 PRINTS Tyrosine kinase catalytic domain signature 82 100 IPR001245 GO:0004672|GO:0006468
Psa5g1445 208 PRINTS Tyrosine kinase catalytic domain signature 153 175 IPR001245 GO:0004672|GO:0006468
Psa5g1445 208 PRINTS Tyrosine kinase catalytic domain signature 197 208 IPR001245 GO:0004672|GO:0006468
Psa5g1445 208 Gene3D Transferase(Phosphotransferase) domain 1 1 208 - -
Psa5g1445 208 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
Psa5g1445 208 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1445 208 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 2 208 - -
Psa5g1445 208 Pfam Protein tyrosine and serine/threonine kinase 4 208 IPR001245 GO:0004672|GO:0006468
Psa5g1445 208 PANTHER SERINE-THREONINE PROTEIN KINASE 2 208 - -
Psa5g1445 208 SMART serkin_6 6 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1445 Psa-Chr5 111658876 111660230 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1445 2 208 MAP Kinase Kinase Kinase AT1G16270 79.710 4.18e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Psa5g1445 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1445 - - aprc:113872358 405.216