Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1432 ACACAAGACCAGACTCCACATTGGACAATTGGTGAAGGATACGTCGGATAAACTTAAACAAGCTAGTGAAATTGATCATCATGTTGATGTTAATGCAACCAAGAAGATAGCAGATGCTAAATTGGCCAAAGATTTCCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTGCAGCCGAGAGGGAGACAGCTTACACTCCTTTTGTTCCGCAAGATGCTAAGCCATCCAGCTATACAGTCAGTGGAGTAGGTGTCAGTTCTGATAAAAGTCAAGAACAACGTGCCCTTCTTGTGGAATCTAAAAGTAAAAAAAGGTTGTTTAACTATGGTGCTTATTCTGCTAAAACAGGAACTTATGTTGATATGGTGAAGGCTGGGATTATGATCCTGTTAATTGTTAAGAACAGCTTTGGTAGATGTGCAGTGTATCGTTGTTACTGA 445 0.4067 HKTRLHIGQLVKDTSDKLKQASEIDHHVDVNATKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQDAKPSSYTVSGVGVSSDKSQEQRALLVESKSKKRLFNYGAYSAKTGTYVDMVKAGIMILLIVKNSFGRCAVYRCY* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1432 147 Pfam Syntaxin-like protein 1 66 IPR006011 GO:0016020
Psa5g1432 147 PANTHER SYNTAXIN OF PLANTS PROTEIN 3 108 - -
Psa5g1432 147 SUPERFAMILY t-snare proteins 3 73 IPR010989 GO:0016020|GO:0016192
Psa5g1432 147 Gene3D - 1 70 - -
Psa5g1432 147 PANTHER SYNTAXIN 3 108 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1432 Psa-Chr5 111266358 111268599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1432 1 105 SNARE and Associated Proteins AT5G46860 73.333 2.86e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1432 - K08488 gsj:114390582 171.014