Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1431 ATGAAGAAACAATGGTGTGAGATTGAGGCAATAGGCATTAACTACAGGATCCACAGCACAAAGACAATAAAACAACCTTTTAAAATCTTCAACAAACCTCTAAAACCAGAAGATGAAGCAAAAGCTGGAGAAATGCCGGGTAGTGGAGTTAAGCACGTTCTCAAAGATGTTAATTGCATAGCCAAGCCATGTGAAATTCTTGCGATTGTTGGGCCAAGTGGAGCAGGAAAATCATCACTGCTGGAGATTCTTGCTGGTAGAGTTAGTCCACAAAATGGAGGTTCTATCTTGGTGAACCAGGAGCATGTAGATAAATCTCAGTTCAGAAAAATTTCAGGGTATGTTACACAGAAGGATACCCTTTTCCCTTTACTTACAGTTGAAGAAACCATGATGTTTAGTGCAAAACTAAGGCTAAATCTTCCTCAAGAAAAACTATGCTCCAAGGTTAAGTCACTGATTCAAGAGCTTGGTCTTAGCCATGTTGCTAGGACTAGAGTAGGAGATGGAGATGACAGAATCCGCGGAATATCTGGTGGCGAGAGGCGTCGAGTTTCCATTGGTGTTGAAGTCATACATGATCCAAAAGTGTTGATTCTTGATGAAGCAACTTCAGGTCTTGACAGTACCTCAGCTTTGCAAATAATTGATATGCTGAAAGTCATGGCTGAATCTAGGGGAAGAACTATAATACTAAGTATTCATCAACCCGGGTTCAGGATAGTGAAGTTGTTCAATTCAATACTGTTGTTAGACAATGGCAGTGTGTTGCATCATGGGAGTGTGGATTTGTTGGATGTGAATCTGAGGTTGATGGGTTTAGAACTTCCTCTTCATGTTAATGTTGTTGAGTTTGCTATTGAATGCATTGAGACTATTCAGCAACGACAGAAAAGTCTGCAAGTTCAGGTTGAAGCGCCGAAACGCGTACTCGGGTCAATGATACTAAAGAAAGGCGATGATCAAGGTGAAACTAGAAGTGGTAAGTTAACTCTACTACAGCTATTTCAACAATCCAAGGTATTTGACATAGAAAACATCAATGTAGGAATGGATTTCACTTGTGATTATGCTAATTCTAGATTGAGAGAAACAATGATTCTTGCTCATAGGTTCTCCAAAAACATTCTACGTACAAATGAGCTCTTTGCATTTAAGACAGTTCAGATGCTGATTTCTGGTCTGGTTTTAGGCTCCATATTTGGTAATCTCAAAGATGGTTTAGTGGGAGCAGAACAGAGAGTTGGTTTATTTGCTTTCATACTAACGTTTTTGTTATCAAGCACCATTGATGCTCTACCGATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACATCAAGCGGAAGCTACAGAGTTTCATCCTATGCTTTAGCCAATGGCATAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTCGCAGTGCCGCTGTACTGGATTGTCGGTCTCAACCAAAACTTCACGGCGTTTTTGCACTTTCTGTTGCTAATATGGCTGATTCTGTATACTGCGAATTCAGTTGTGGTATGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCGGTAATTGCCGGTGTCATTGGTTCGTCTTTTTTGTTCTCTGGTTACTTCATATCCAATCATGAAATTCCAAACTACTGGATTTTCATGCATTATTTATCGCTATTTAAGTATCCCTTTGAAGGGTTTCTAATAAATGAGTTCTCCAACTCAAAGAAATGCTTAGAGTACATGTTCGGGGCATGTGTGATGAAGGGAGAGGATATACTTAAAGAAGAAGGGTATGGAGGAGAGAGTAGTAGATGGAAGAATGTTGGGGTGATGGTGTCCTTTATCTTTGTTTATAGATTCATTTCTTATGTAATTCTCAGATACAGAAGTTCCCAGCGTGTCATCTTCTGA 1917 0.3959 MKKQWCEIEAIGINYRIHSTKTIKQPFKIFNKPLKPEDEAKAGEMPGSGVKHVLKDVNCIAKPCEILAIVGPSGAGKSSLLEILAGRVSPQNGGSILVNQEHVDKSQFRKISGYVTQKDTLFPLLTVEETMMFSAKLRLNLPQEKLCSKVKSLIQELGLSHVARTRVGDGDDRIRGISGGERRRVSIGVEVIHDPKVLILDEATSGLDSTSALQIIDMLKVMAESRGRTIILSIHQPGFRIVKLFNSILLLDNGSVLHHGSVDLLDVNLRLMGLELPLHVNVVEFAIECIETIQQRQKSLQVQVEAPKRVLGSMILKKGDDQGETRSGKLTLLQLFQQSKVFDIENINVGMDFTCDYANSRLRETMILAHRFSKNILRTNELFAFKTVQMLISGLVLGSIFGNLKDGLVGAEQRVGLFAFILTFLLSSTIDALPIFLQEREILMKETSSGSYRVSSYALANGIVYLPFLLILAILFAVPLYWIVGLNQNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSSFLFSGYFISNHEIPNYWIFMHYLSLFKYPFEGFLINEFSNSKKCLEYMFGACVMKGEDILKEEGYGGESSRWKNVGVMVSFIFVYRFISYVILRYRSSQRVIF* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1431 638 Gene3D - 44 308 IPR027417 -
Psa5g1431 638 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 630 - -
Psa5g1431 638 Pfam ABC-2 type transporter 365 573 IPR013525 GO:0016020|GO:0140359
Psa5g1431 638 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Psa5g1431 638 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 278 IPR003439 GO:0005524
Psa5g1431 638 SMART AAA_5 63 255 IPR003593 -
Psa5g1431 638 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Psa5g1431 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 264 IPR027417 -
Psa5g1431 638 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1431 Psa-Chr5 111233360 111235276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1431 59 307 Calmodulin-binding Proteins AT2G36910 25.670 1.20e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1431 K05681 - gmx:121172640 955.666