Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1395 ATGAATAACAAGAAACAGGTATATCCTACTGCTGCTATTAAGGGAGTTCCAGTGGCTAGAAGAGTGGTGGTGGCCCCTAAACCTGTTCAGAAGAAAGTCACTGCAAAACCAAAGCTTGTCGATGCAATTGATATGATAAGTTCAAAAGAGAGGGACGTGCATGAAATTGTTGGACGCATCAATGGAAGATTTGGAACACTTATTGTTGTCCCGATACACCATCTGGATCGGTCACTTGACTTTCATGCGTTACGTGCATCCTATGCAGTTACTGATGTAACACTTGTTGCATCATTAAGGTGCAGCACAATCCCTTGGTGCTGGTGCTATCTCGGTAAATCATCGGAGAAAGAAACAGTACATAATAGTGATGGTAAGGTTGGTGTTGGGCCTACAAACACAGAAGCTCCTGGCACTGGCAATGGCCATGGAAAAACTCATGTTTCGAATGCCAAGAGCATCAAAGGTCATAGAAAACCTAGTCAAAGTTTTATTGATGTGATTGAACTGCTGCTTGAACCTATATGCACTTGTGTTCCTCCCTTGAAGGACGACTACTACAAAATTCTTGTTATTGAGGAAGGTTTAGTTCCTGTGCCATTAATAGGTGTCGTAGCTTATAAGTCATACACCCCACATCAAGGTGGATTAATTGAACTTGAGAAACTGTTAAAGCAGAAGACTTTCACCAGGTCTGAGATTGATCATTTGACAGCCCTTATGCAGTCAAGGACTGTAGAAGCACCTATTAGGGGAGGAAGAAGACTCAAACTAAATATGGCAAAAGCTGGATGCAAATCCATAACAGTGCTAGGTGTGGACTTTATGTCGGAAAATGTGCGCGCCATCCTTGATCAAGTCGGTTTCAATGAGGTCGATGTTTATAGAATGTTAAATGAGCGTATTGGTTGTTCACTGGCTGATGTTGCAGCTACCTCTACTTATATGGAGTATCTTGAGCCAGCTTCTAGGTTTACTTCTTTGCATGTCATATACATTAACACTAAGTCAGAGACAAAGGCATATGCTCATGAGCTTGTGCCAACAATAACCTGTACCTCATCAAACGTTATCCAGACTATTCTACAGGCATTTGCCCAAGTGCCAGATTTGAGCATATATTATGGGCCTGATTCTTACATGGGTGCAAATATTGTAGAATTGTTCCAACAGATGACAGTAATGACCGATGAAGAGATTGCTGTGATACATCCTGAGCACAATAATTCTGTTATGAGTGCTTTTCAAACAGTAGCACACAGTTGCATTTATAGTAGCAACTGTGTGACCTGCTACAGCAGGTTACCTGTTGCTGAGGACTTGACACATGTCAGTCATTACAAGGGCTTATCATTGGATTTGTTACTGAATACTATACCAGCAATGCATACAACCCTGTGCAAGATGTTGCTGATTCCTGTAGGACTGGTGTTGCTACCAATGTTATCTTTGGTCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTTGCAATTAGTATTTTTGTAAGTTTCAGTTTTGCTGCCATGCATGTTGTTGTTGTTGCTGCACTTGGAATGTTGAGTACTATAGCAACCGGATTAGCCACCGATGCATACGGTCCAATCAGTAATAATGTCGGAGATATTGCCGAGATGGCTGGAATGAGTCACATAATTCGTGAGAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGCTTCCATTGGAAATGGGTTTGCTATCGTCGGATTATTGGAGAGCTGTGTTGGTTTCAATGATATCGCCTTAAAACATGGTTGGCGGAATACTAAAATCTTGAAAGCTTATTCTCCAGGACTTGGAAATTTGGCAGCTTCTGTGAACTATCTTGGTGGTGCCAATGACAAAAAGGAGACTATCACAGTTGTTCAAGAAATCATGGATGCTGAGATAAAGGTTGTAGGAGGTTGTGCAAAGGCAACAAGTGACTTCAAATGGTCGTCTTCAGACATATCTACTGCATCTGTCTCCGCTTCCGAAACTGTTGTTGGATCTCATCTTCAAGCTGCGGTGACAATGAAAACAACGAATGGTGCGTTCTTCTACAGATGTGATGCCTTCAATTCTTGGATAAAGTGGAAGGCTGGAACTTCTTTACGTATTGCGGCATATCTACCCTTTATCGTAAGCCAGGCAGGTGATGGAAACCACTTTGGTGGTTACTGGTTTGACTTGGCTCAAGCCGAAAATAATAAGCAGATGTTCAGATGTGCATTACGACAAAGTCCTTCTTCATCGTTAGCTAATGATTACGTCACAGCACTTGCCGAGGGGATTGGTTCTGGTTTCTACAGACATTTTCTTGGTCTTCTTTGGAAAGATGATTATCCCACTGATTTCTCAGAAGCTGAATCTAATGTCGATTCAGAATGGGATTCTTTTTGTCGTGTAATTATGAAAATCTGCAGAAAATCTAACATTGTATCTCAAAAGCGTTCTGGTTTG 2478 0.4161 MNNKKQVYPTAAIKGVPVARRVVVAPKPVQKKVTAKPKLVDAIDMISSKERDVHEIVGRINGRFGTLIVVPIHHLDRSLDFHALRASYAVTDVTLVASLRCSTIPWCWCYLGKSSEKETVHNSDGKVGVGPTNTEAPGTGNGHGKTHVSNAKSIKGHRKPSQSFIDVIELLLEPICTCVPPLKDDYYKILVIEEGLVPVPLIGVVAYKSYTPHQGGLIELEKLLKQKTFTRSEIDHLTALMQSRTVEAPIRGGRRLKLNMAKAGCKSITVLGVDFMSENVRAILDQVGFNEVDVYRMLNERIGCSLADVAATSTYMEYLEPASRFTSLHVIYINTKSETKAYAHELVPTITCTSSNVIQTILQAFAQVPDLSIYYGPDSYMGANIVELFQQMTVMTDEEIAVIHPEHNNSVMSAFQTVAHSCIYSSNCVTCYSRLPVAEDLTHVSHYKGLSLDLLLNTIPAMHTTLCKMLLIPVGLVLLPMLSLVLPWDTSLLSFQFLPFAISIFVSFSFAAMHVVVVAALGMLSTIATGLATDAYGPISNNVGDIAEMAGMSHIIRERTDALDAAGNTTASIGNGFAIVGLLESCVGFNDIALKHGWRNTKILKAYSPGLGNLAASVNYLGGANDKKETITVVQEIMDAEIKVVGGCAKATSDFKWSSSDISTASVSASETVVGSHLQAAVTMKTTNGAFFYRCDAFNSWIKWKAGTSLRIAAYLPFIVSQAGDGNHFGGYWFDLAQAENNKQMFRCALRQSPSSSLANDYVTALAEGIGSGFYRHFLGLLWKDDYPTDFSEAESNVDSEWDSFCRVIMKICRKSNIVSQKRSGL 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1395 826 Pfam Inorganic H+ pyrophosphatase 497 580 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g1395 826 Gene3D Glycogen Phosphorylase B; 32 103 - -
Psa5g1395 826 SUPERFAMILY NadA-like 261 419 IPR036094 GO:0008987|GO:0009435|GO:0051539
Psa5g1395 826 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 40 101 - -
Psa5g1395 826 Pfam Glycosyltransferase family 20 46 100 IPR001830 GO:0003824|GO:0005992
Psa5g1395 826 Gene3D - 317 398 IPR036094 GO:0008987|GO:0009435|GO:0051539
Psa5g1395 826 PANTHER QUINOLINATE SYNTHETASE A 259 420 IPR003473 GO:0008987|GO:0009435|GO:0051539
Psa5g1395 826 Pfam Quinolinate synthetase A protein 260 412 IPR003473 GO:0008987|GO:0009435|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1395 Psa-Chr5 108257378 108266295 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1395 501 579 Primary Pumps ATPases AT1G15690 87.342 4.27e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1395 K03517 - gmx:100780834 259.996