Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1394 ATGAATAACAAGAAACGGGTCTATCCTGCTGCTGCTGTTAAGGGAGTTCCAGTGGCTAGAAGAGTGGCGGTGGCCCCCAAACCTGTTCAGAAGAAAGTCACTGCAAAACCAAAGCTTGTGAATGCAATTGATATGATAAGTTCAAAAGAGAGAGACGTGCATGAAATTGTTGGACGCATCAATGGAAGATTTGGAACACTTATTGTTGTCCCGATACACCATCTGGATCGGTCACTTGACTTTCATGCGTTACGTGCATCCTATGCAGTTACTGATGTAGCACTTGTTGCATCATTAAGGTGCAGCACAATCCCTTGGTGCTGGTGCTATCTCGGTAAATCATCGGAGAAAGAAACAATACATAATAGTGATGGTAAGGTTGGTGTTGGGCCTACAAACACAAAAGCTCCTGGCACTGGCAATGGCCATGGAAAAACTCATGTTTCGAATGCCAAGAGCATCAAAGGTCATAGAAAACCTAGTCAAAGTTTTATTGATGTGATTGAACTGCTGCTTGAACCTATATGCACTTGTGTTCCTCCCTTGAAGGACGACTACTACAGAATTCTTGTTATTGAGGAAGGTTTAGTTCCTGTGCCATTAATAGGTGCCGTAGCTTATAAGTCATACACCCCACGTTCGGTTCGGATAATATCTGATGGCGTGGATGCAACTTCGAGCTGCATGCCAGTAGCATCTGCAACGACTACCATGTTAGCATTCTTCATGCCTTGCGTGAAAGTGAAGTGTCGGCTTGAGGTCGTAAAGCTGGAGCAGTTGGTGAAAAGTATGTTCAAAATTAATTGTTCTGCCTCAAGATCAAGGTGGATTAATGAACTTGAGAAACTGTTAAAGCAGAAGACTTTCACCAGGTCTGAGATTGATCATTTGAACAGCCTAGCAGTCAAGGACTCGTTAGATCAGGAGGAATGCCTATTCAGGGGAGGAAGAAGAACTCAAAGCATTTGCCCAAGTGATGATTTGAGCATGGAGGATTTATGGGCTGATTTTACAATGGTGCAAAATATTGTAGAATTGTTCCAACAGATGACAGTAATGACCGATGAAGAGATTGCTGTGATAACATCCTGA 1092 0.4304 MNNKKRVYPAAAVKGVPVARRVAVAPKPVQKKVTAKPKLVNAIDMISSKERDVHEIVGRINGRFGTLIVVPIHHLDRSLDFHALRASYAVTDVALVASLRCSTIPWCWCYLGKSSEKETIHNSDGKVGVGPTNTKAPGTGNGHGKTHVSNAKSIKGHRKPSQSFIDVIELLLEPICTCVPPLKDDYYRILVIEEGLVPVPLIGAVAYKSYTPRSVRIISDGVDATSSCMPVASATTTMLAFFMPCVKVKCRLEVVKLEQLVKSMFKINCSASRSRWINELEKLLKQKTFTRSEIDHLNSLAVKDSLDQEECLFRGGRRTQSICPSDDLSMEDLWADFTMVQNIVELFQQMTVMTDEEIAVITS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1394 363 Pfam Glycosyltransferase family 20 46 100 IPR001830 GO:0003824|GO:0005992
Psa5g1394 363 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 52 100 - -
Psa5g1394 363 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 52 100 IPR001830 GO:0003824|GO:0005992
Psa5g1394 363 Gene3D Glycogen Phosphorylase B; 29 103 - -
Psa5g1394 363 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 42 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1394 Psa-Chr5 108237187 108239481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1394 53 100 Trehalose Biosynthesis Gene Families AT1G78580 89.583 6.81e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1394 K16055 - gmx:100788161 103.605