Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1337 ATGAACAAGATAGGCTTTGGATTTTTCATCATTTTTTTTATTCTCCTTGTTTCTCAGATGGTGGTAGAAACCGAGGGAAATAGTTGTCAGTCAAAGAGTAGTCAATTTAAAGGGATTTGTTTAAGTAATAAAAAGTGTGCTAGAGTTTGTCATTTAGAAGGTTTTCTTGAAGGTGGTAAATGCAAGGGAAAACTTTTGAAACACTGCTCCTGCAAAAAGAGTATATGTTAA 231 0.3333 MNKIGFGFFIIFFILLVSQMVVETEGNSCQSKSSQFKGICLSNKKCARVCHLEGFLEGGKCKGKLLKHCSCKKSIC* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1337 76 SUPERFAMILY Scorpion toxin-like 28 73 IPR036574 -
Psa5g1337 76 Gene3D - 27 76 IPR036574 -
Psa5g1337 76 PANTHER DEFENSIN 1 74 - -
Psa5g1337 76 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Psa5g1337 76 PRINTS Purothionin signature 44 57 IPR008176 GO:0006952
Psa5g1337 76 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Psa5g1337 76 Pfam Gamma-thionin family 28 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1337 Psa-Chr5 104611207 104612139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1337 8 73 Plant Defensins Gene Families AT5G63660 49.275 2.04e-13 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1337 - K01059 pvu:PHAVU_009G158100g 64.6994