Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1332 ATGTCGACTTTTCACGTCGGCGGCAAGGTCGTCGACAAGGTTGATTTGCTGAGGAAGAAGCAATTGTTATGGCGCTTAGACGTTTGGCCTTTCGCCGTTTTTTACGGCGCGTGGGTTTCAGTTATTCTTCCCAGCCTTGATTTTGTTGATGCCTGTATTGTTTTAGGTGCTTTGTCTTCTAGTCATATACTCGTTTGTCTCTTCACCGCTTGGTCAGTTGATTTCAAATGTTTTGCATATTATAGCAAGGTCAAAAATATTGATCAGGCTGATTCTTGTAAGATAACTCCGGCTAAGTTTTGTGGTTCTAAAGAAGTTGTACCTCTTAATTCTCGGAAATCATCTGCAGGTTCTTCATCAGTGGATCTGGAAGAGATCTACTTTGATTTTAGAAAACAATGTTTTGTTTATTCGAAGGAGAAGGGGACTTTTTACAAACTTTCTTATCCTACCAAGGAAACATTTGGACATTATCTCAAGTGTAGTGGCCATGGCTCTGAAGCCAAAGTTCTTGCTGCTACCGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCATTGCATGGAACCTTTTTTTGTGTTTCAGGTTTTTTGTGTTGGTCTCTGGTGTTTGGATGAATATTGGTACTATAGTTTGTTCACTCTATTTATGCTGTTTATGTTTGAGTCGACCATGGCAAAAAGTCGGTTAAGGACTCTGACTGAGTTAAGACGTGTTAGAGTGGATAATCAGATTGTTATGGTACATCGTGGTGGCAAATGGGTAAAGCTATCTGGTACAGACCTTTTGCCTGGAGACGTTGTCTCTATAGGCCGTTCTTCTGGTCAGAATGGAGAGGAGAAATCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGATTTCTATTGCGGGTAGGGGTATTGAGGAGAAGTTGTCAGCAAAGCGAGATAAAGCCCATGTTTTATATGGTGGAACCAAAATATTGCAGCACTCTGCAGATAAGACCTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCCTTAGAACTGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGTTGGGAAAGTGGACTGTTCATTTTATTCTTGGTTGTATTTGCTTTAATTGCGGCTGGTTATGTGTTTATTAAGGGGCTAGAAGACCCCTCAAGGAGCAAGTATAAACTTATACTTAACTGTTCTCTTATTGTTACTTCTGTGATACCTCCCGAGTTACCAATGGAATTATCTATAGCTGTTAATACTTCTCTGATTGCACTTGCACGCCGAGGAATTTTTTGCACAGAACCTTTTCGGATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACACTTACATCTGATGACATGGAATTTTCCGGAGTGGTTGGGTTGACAGAAACTACAGATTTGGAATCTGACATGAGTAGAGTGCCTGTGCGAACAGTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGCGATCCTCTCGAGAAGGCCGCACTCAAGGGAATTGATTGGAGTTATAAATCTGATGAGAAGGCCGTTCCTAAAAGGGGAAATGGCCATCCTGTTCAAATTGTTCAGCGGTATCATTTTGCATCTCACTTAAAACGAATGGCAGTTATTGTTCGTATTCAGGAGGAATTTTTTGCATTTGTGAAGGGGGCCCCAGAAATTATACAAGATAGGCTCATTGATGTGCCTCCATCGTATGTTGAGACCTACAAAAAATATACACGCCAGGGGTCTCGTGTTCTTGCCTTGGCTCACAAGTCTCTTTCAGACATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATATGGTGGAAAGTGGACTTACTTTTGCCGGTTTTGTGGTGTTTAATTGTCCCATAAGATCAGATTCAGCTGATGTTTTATCAGGATTGAAAGAATCTTCACATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACAGCCTGTCATGTCGCTAGCCAAGTGCATATTATATCAAAACCGACATTAATACTTAGTCCAGCAAGTAATGGTGAAGGATATAGTTGGGTGTCCCCCGATGAGAATGAAAACATTCGATACAGTAAGGAAGAGGTTGAAATTTTGTCAGAGTCTCATGATCTGTGTGTTGGAGGTGATTGCTTTGAGATGTTGCAACAGACATCAGCTCATCTTCTGGTCATTCCTTATGTGAAGGTTTTTGCTAGAGTTGCTCCTGAGCAAAAGGAACTTATCTTGACCACTTTTAAAACAGTTGGACGGGTAACATTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTAAAGCAGGCCCATGTAGGAGTTGCTCTTCTGAATGCAATGCCGCCAGCTAAAGGTGGAAACTCCGCTTCAGATTCATCCGCCGAAGACAGTTCAAAACCTGCTAAGCAAAAGAAATCCAAGCTTGCAGGTGAAACATCTGGAAAGAGTATTAGCCCAAGTGGAGAAGGCACTTCAAAAGCCAAAGTTGCTTCTAAATCAGACTCCACTAGCCATTCAGCTGTTAACCGTCATCAAACAGCTGTTGATATGCAAAGACAGAAGCTTAAGAAGATGATGGATGAGCTTAATGAAGATGGAGATGGGCGTGCACCCATTGTCAAGCTTGGTGATGCCTCAATGGCATCCCCGTTCACCGCTAAGCATGCATCTGTATCTCCCACCACTGACATAATTCGACAGGGTCGGAGTACCCTAGTGACAACCCTTCAGATGTTTAAAATTCTGGGCCTCAACTGCCTTGCCACTGCATATGTCTTGAGTGTTATGTATCTGGATGGTGTGAAGCTAGGTGATGTACAAGCAACAATAAGTGGTGTCTTCACTGCTGCATTCTTCCTCTTTATTTCACATGCACGCCCACTTCCCACTCTCTCAGCTGAACGTCCCCACCCCAACATCTTCTGTGCTTATGTCTTGCTTTCCCTCTTGGGACAATTTTCTGTTCACTTGTTTTTTCTTATGGCATCTGTCAAAGAAGCTGAAAAATACATGCCAGAAGAATGTATCGAACCTGATGCAAGTTTTCACCCCAACCTGGTTAATACTGTTTCCTACATGGTGAGCATGATGCTCCAGGTGGCCACATTTGCCGTAAACTACATGGGCCATCCCTTCAACCAAAGTATTTCTGAAAACAGGCCTTTCCGTTATGCCCTCGTTGCTGCTGTTGTTTTTTTTACTGCGATAACATCTGATCTCTTCAGGGATTTGAATGACTGGTTGAAGTTGGTGCCATTGCCAGTGGGTTTGAGGAATAAACTATTGATTTGGGCTTTTCTGATGTTTTTCGTATGCTACTCATGGGAGAGACTGTTGAGGTGGGCTTTTCCTGGTAAAGTCCCAGCTTGGAAGAGGCGACAACAGGTTGCTGTATCTAATTTAGAAAAGAAGAAAGAGCTCTAA 3576 0.4256 MSTFHVGGKVVDKVDLLRKKQLLWRLDVWPFAVFYGAWVSVILPSLDFVDACIVLGALSSSHILVCLFTAWSVDFKCFAYYSKVKNIDQADSCKITPAKFCGSKEVVPLNSRKSSAGSSSVDLEEIYFDFRKQCFVYSKEKGTFYKLSYPTKETFGHYLKCSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLRTLTELRRVRVDNQIVMVHRGGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKISIAGRGIEEKLSAKRDKAHVLYGGTKILQHSADKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVFIKGLEDPSRSKYKLILNCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLTETTDLESDMSRVPVRTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAVPKRGNGHPVQIVQRYHFASHLKRMAVIVRIQEEFFAFVKGAPEIIQDRLIDVPPSYVETYKKYTRQGSRVLALAHKSLSDMTVSEARSLDRDMVESGLTFAGFVVFNCPIRSDSADVLSGLKESSHDLVMITGDQALTACHVASQVHIISKPTLILSPASNGEGYSWVSPDENENIRYSKEEVEILSESHDLCVGGDCFEMLQQTSAHLLVIPYVKVFARVAPEQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAMPPAKGGNSASDSSAEDSSKPAKQKKSKLAGETSGKSISPSGEGTSKAKVASKSDSTSHSAVNRHQTAVDMQRQKLKKMMDELNEDGDGRAPIVKLGDASMASPFTAKHASVSPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVLLSLLGQFSVHLFFLMASVKEAEKYMPEECIEPDASFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENRPFRYALVAAVVFFTAITSDLFRDLNDWLKLVPLPVGLRNKLLIWAFLMFFVCYSWERLLRWAFPGKVPAWKRRQQVAVSNLEKKKEL* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1332 1191 Pfam haloacid dehalogenase-like hydrolase 484 712 - -
Psa5g1332 1191 ProSitePatterns Hypothetical cof family signature 2. 808 830 - -
Psa5g1332 1191 SFLD Haloacid Dehalogenase 468 954 - -
Psa5g1332 1191 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 44 1148 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Psa5g1332 1191 CDD P-type_ATPase_cation 169 1106 - -
Psa5g1332 1191 SUPERFAMILY Calcium ATPase, transduction domain A 254 386 IPR008250 -
Psa5g1332 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 489 495 IPR018303 -
Psa5g1332 1191 PANTHER CATION-TRANSPORTING ATPASE 1 1182 - -
Psa5g1332 1191 Pfam E1-E2 ATPase 255 467 - -
Psa5g1332 1191 PRINTS P-type cation-transporting ATPase superfamily signature 307 321 - -
Psa5g1332 1191 PRINTS P-type cation-transporting ATPase superfamily signature 487 501 - -
Psa5g1332 1191 PRINTS P-type cation-transporting ATPase superfamily signature 689 699 - -
Psa5g1332 1191 PRINTS P-type cation-transporting ATPase superfamily signature 808 827 - -
Psa5g1332 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 166 1168 IPR023298 -
Psa5g1332 1191 SFLD p-type atpase 468 954 IPR044492 -
Psa5g1332 1191 SUPERFAMILY HAD-like 482 835 IPR036412 -
Psa5g1332 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 493 677 IPR023299 GO:0000166
Psa5g1332 1191 Coils Coil 892 912 - -
Psa5g1332 1191 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1182 - -
Psa5g1332 1191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 402 512 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g1332 1191 MobiDBLite consensus disorder prediction 861 899 - -
Psa5g1332 1191 Gene3D - 482 667 IPR023299 GO:0000166
Psa5g1332 1191 Gene3D - 223 387 - -
Psa5g1332 1191 MobiDBLite consensus disorder prediction 834 902 - -
Psa5g1332 1191 Gene3D - 668 845 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1332 Psa-Chr5 104328267 104341091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1332 1 1191 Primary Pumps ATPases AT5G23630 77.824 0.0 1914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1332 K14950 - gmx:100789385 2135.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1332 5 104328267 104341091 Psa5g1332 5 104328267 104341091 ECH