Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1330 ATGACTGCTGCATTGTCTTACCAGTATAGCTGTTGGTCTGGTCTTAAATACGCTAACGACACTGAATTAGTTTTCAAAGCTATGTCGTTTCTTGAGTCTCTCACCGGCCTCTCCAGCAATGCTCTCAGCATGATTCTCTCTTATGATCTCTTCGGTAATGACACTCATTCATGGAGGCCACCTCGCACTGAGCGCGATGGTTTTTGGGAGGATTCCGGCTCGGGTGTATTCGGCCCGGGACCTTCGGTGCCGGCGAATCTTACGCCGGATGTTAAGGTGTGTAAGGACGCGGGCAGTGGGTGTTACGGGACGGTTCAGGAAGCAGTTGATGCTGCGCCGGATAATGTGGACATTGGTGGAGGGAGGAGATTTGTGATACATATAAAGGAAGGGGTTTATGAAGAGAGGGTTAGGATTCCGTTAAGGAAGAGGAATGTTGTGTTTTTGGGGGATGGCATTGGTAAGACTGTCATCACCGGCTCTGCAAGTGTTGGACTACAGAAGGGAATGACAACATATAACTCTGCCACGGTTGGGGTTGTTGGGGATGGATTCATGGCGAAGGATCTCACATTTGAAAACACAGCAGGTGCGAATGCACACCAAGCAGTAGCATTCAGATCAGACAGTGATCTTTCTGTTATCGAGAATTGTGAATTCATAGGCAATCAAGATACTCTCTATGCTCATTCCCTGCGCCAGTTTTATAAATCTTGCCGTATCATAGGTAATGTGGACTTCATCTTTGGAAACTCAGCTTCATTCTTCCAAGACTGTGAACTCCTAGTCCAGCCTAGGCAAGCGAGGCCAAAGAAAGGGGAGAACAACGCCATTACTGCACATGGCAGAACTGACCCTGCTCAGTCGACAGGTTTTGTTTTCCACAATTGCTTGATTAATGGTACTGAAAAATATATGGAGTTGTATTATGACAAGCCTAAAGTACACAAGAACTATCTCGGAAGACCGTGGAAGGAGTATTCTAGAACAGTTTTTATTAATTCGTTCATGGAAACCATAATCACACCACAGGGTTGGATGCCATGGAGTGGAGATTTTGGACTGAATACACTCTACTATGGGGAAATCGGAAACTCTGGACCCGGTTCTAATTTGACTAAGAGAGTGTCCTGGAGTAGTCAGGTTCCTGCTGAACATGTGTACACGTATTCACTGCAGGGTTTCATTCAAGGAGATGATTGGGATAGCCGTATCAGTTATTAG 1224 0.46 MTAALSYQYSCWSGLKYANDTELVFKAMSFLESLTGLSSNALSMILSYDLFGNDTHSWRPPRTERDGFWEDSGSGVFGPGPSVPANLTPDVKVCKDAGSGCYGTVQEAVDAAPDNVDIGGGRRFVIHIKEGVYEERVRIPLRKRNVVFLGDGIGKTVITGSASVGLQKGMTTYNSATVGVVGDGFMAKDLTFENTAGANAHQAVAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSASFFQDCELLVQPRQARPKKGENNAITAHGRTDPAQSTGFVFHNCLINGTEKYMELYYDKPKVHKNYLGRPWKEYSRTVFINSFMETIITPQGWMPWSGDFGLNTLYYGEIGNSGPGSNLTKRVSWSSQVPAEHVYTYSLQGFIQGDDWDSRISY* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1330 407 PANTHER PECTINESTERASE 1 401 - -
Psa5g1330 407 SUPERFAMILY Pectin lyase-like 91 403 IPR011050 -
Psa5g1330 407 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 1 401 - -
Psa5g1330 407 Pfam Pectinesterase 90 399 IPR000070 GO:0030599|GO:0042545
Psa5g1330 407 Gene3D - 84 407 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1330 Psa-Chr5 104147093 104148531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1330 1 403 Carbohydrate Esterase AT5G09760 66.259 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1330 - - gmx:100802102 665.996