Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1318 ATGGATAGGTGGGGTGTTCATCATCGACAGCCATTCATTGGTTGGCATGGGGGAAATGAGAGTTCTTTTCCTGATGTTACTACCAAGGAAGAGGAATCGGACAATGACGAAGAAGACGTCATTATTAAAAATGAACCTGTCTTTTTTCCAGAATTTAAGAAAAGGAAGCGCCTCAGCCTCAGTCAGCTTAGAGAGGTGAAAGAGGAGTCTTGTGGAAAGATTGGTCAGCTTAGAGAGGTGAAAGAGGAGTATTATGGGAAGGAAAGCGGTAGCAAGAGTAAGAGAAAGAAGAATGATAATAAGGAAAGATGGTCAAGCGAGAGGTACAAATTGGCTGAGCAAAGCATGTGGGAGGTATTGAAGGCAGAGGGCGCGACTTTTGAAAGCCCAATAACCCGAGCTGCACTAAGATCATCTGCCCGTAAATTCATTGGTGATACTGGACTTCTAGACCACTTATTGAAACACATTGATGGTAAAGTGGCACCTGGAGGGACTGATCGGTTCCGAAGATGGTTCAACACCGACGGAGTCATGGAGTATTGGTTGGAGAGTGCTGATTTGGATGGTGTCCGGCAGGATGCTGGGGTGTATGACCCCTACTGGATACCACCATCCACTGTTAGGGCAACCCCTGCCCCTTGCAAGGATACTGATTCTTCTGATGAATTGAAGCAACTTAAAATGGAAATGGCCCAAATGAAGAAAGATATGCAGGAGCTCGTTGCCGAGAAGAAAAAGAAAAATGAAAGTAACATGATGAAGGAGGCTTTCAAAGAACTTGTGAAGTGGAAAGCTATAACTGACCATCGCCTAACTGAAATCATGGCTTCCTTGAAGAATTTGCAGGGCAAGTCTGGTGAAATGGTGACTTGGAAAACCGAAGTGGAGCAACATCTTATGGACATAACAAATAAATTGAATGAACTTCAAGCACCAAGAGAATGCACTACTTTTAGCCCTCCTTCAGAGAAATGGAAAGATTGGTTAGAAGCCACTAACCCATGCAATACCCAAGAGGATGCATTGGCAACTTGGATCGGGAGTTCAGAACTACTTAATGTTCCACAAGAGTGTTTACTTGAATATCCCTACACAGGCATGCCAACTCAGCCACTCAATGAAGAACCCACTAACAAGAAGAGTGATGCGGAGGAGCTAATGCCCACAATGCAAGATGATCAACCCAATGTCACCCCAGATTCTTCTACAACTGTTAATTCAAAGGCAGACATTGACAACTCATTGATAATGTTTCAGGAGATGTTTATGGATTTATTCAAATGGAAAGAAAAGATGGAGCAGCAGCTGCTGGATGTATCAAACACTGTATATGGCATGCTAGCAATGAAGTAG 1356 0.4358 MDRWGVHHRQPFIGWHGGNESSFPDVTTKEEESDNDEEDVIIKNEPVFFPEFKKRKRLSLSQLREVKEESCGKIGQLREVKEEYYGKESGSKSKRKKNDNKERWSSERYKLAEQSMWEVLKAEGATFESPITRAALRSSARKFIGDTGLLDHLLKHIDGKVAPGGTDRFRRWFNTDGVMEYWLESADLDGVRQDAGVYDPYWIPPSTVRATPAPCKDTDSSDELKQLKMEMAQMKKDMQELVAEKKKKNESNMMKEAFKELVKWKAITDHRLTEIMASLKNLQGKSGEMVTWKTEVEQHLMDITNKLNELQAPRECTTFSPPSEKWKDWLEATNPCNTQEDALATWIGSSELLNVPQECLLEYPYTGMPTQPLNEEPTNKKSDAEELMPTMQDDQPNVTPDSSTTVNSKADIDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1318 451 MobiDBLite consensus disorder prediction 15 39 - -
Psa5g1318 451 PANTHER DYAD PROTEIN 3 450 - -
Psa5g1318 451 Coils Coil 224 251 - -
Psa5g1318 451 PANTHER PROTEIN DYAD 3 450 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1318 Psa-Chr5 102446566 102450708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1318 103 184 PHD Transcription Factor Family AT5G22260 39.759 1.50e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1318 - - gmx:100806484 644.039