Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1314 ATGTCGAATTCCAGCAACCCACCACCACCAAAACCCACATGGGTTCTCCCTTACGTAACAGAGAATCTCCGTGAACTCTACACCTTAGGTAGAAAACTGGGTCAAGGTCAATTCGGCACCACCTATCTCTGCACACACAACCCAACCGGTCGAACCTACGCTTGCAAATCAATCCCAAAGAAGAAGCTTCTATGCAAAGAGGATTACGATGATGTGTGGAGAGAGATTCAGATAATGCACCATTTATCTGAGCATCCTAATGTTGTCAGGATCCATGGGACTTATGAGGATTCGTTTTCTGTTCATTTGGTTATGGAGCTTTGTGAAGGTGGTGAGTTGTTTGATAGGATTGTGAAGAAGGGGCATTATAGTGAGAGGGAAGCTGCTAAGTTGATTAGAACTATTGTTGAGGTTGTTGAAAATTGTCATTCTCTTGGTGTTATGCATAGAGACCTTAAGCCTGAGAATTTTTTGTTTGATACTGTTGATGAAGATGCTGTTCTCAAAACTACTGATTTTGGGTTGTCTGCTTTTTACAAGCCAGGTGAAATCTTTAGTGATGTTGTTGGAAGCCCATACTATGTTGCACCAGAGGTTTTGCACAAGCATTATGGACCCGAGGCTGATGTGTGGAGTGCCGGGATTATTTTGTACATCTTATTAAGCGGGGTGCCGCCATTTTGGGCTGAGACAGAACAAGGGATCTTCAGACAGATTTTGCAGGGAAGACTTGATTTCCAGTCTGAGCCATGGCCTGGGATTTCAGACAGCGCCAAGGATCTAATTCGAAAAATGCTTGATAGGAATCCGAAAAATAGGTTTACAGCTCACCAAGTGCTATGTCATCCATGGATTGTCGATGATAACATTGCACCAGACAAACCTCTTGATTCGGCTGTTTTAACTCGCTTGAAGCAGTTCTCTGCAATGAATAAACTTAAAAAGATGGCTTTACGTGTTATTGCGGAGATGCTGTCCGAGGAAGAAATTGGCGGTTTGAAAGAGTTATTCAGGATGCTTGATGCTGACAGTAGTGGAACCATAACATTGGATGAGCTAAAAGAAGGCTTAAAGCGAGTAGGATCTGAACTTATGGAATCTGAAATCAAGGATCTTATGGATGCAGCAGATGTTGATAATAACGGCACGCTCGACTACGGTGAATTCATTGCTGCTACTGTCCACTTAAACAAGCTGGAAAGAGAGGAAAATCTCTTGTCTGCATTCTCCTACTTTGACAAAGATGGAAGTGGTTACATAACCATTGACGAGATTCAAGTAGCTTGTAAGGAGTTCGGTTTGGATGATATCCATATCGATGAAATGGTCAAGGAAATTGATCAAGATAATGATGGACAAATAGATTATGGAGAATTTGCTGCCATGATGAGAAAGGGCAATGGCGGGATGGGAAGACGAACCATGACAAGCAGACTCAATTTCAGAAATGCTCTTGGAATCATAGGCAATGGGTCCAATTAA 1482 0.4238 MSNSSNPPPPKPTWVLPYVTENLRELYTLGRKLGQGQFGTTYLCTHNPTGRTYACKSIPKKKLLCKEDYDDVWREIQIMHHLSEHPNVVRIHGTYEDSFSVHLVMELCEGGELFDRIVKKGHYSEREAAKLIRTIVEVVENCHSLGVMHRDLKPENFLFDTVDEDAVLKTTDFGLSAFYKPGEIFSDVVGSPYYVAPEVLHKHYGPEADVWSAGIILYILLSGVPPFWAETEQGIFRQILQGRLDFQSEPWPGISDSAKDLIRKMLDRNPKNRFTAHQVLCHPWIVDDNIAPDKPLDSAVLTRLKQFSAMNKLKKMALRVIAEMLSEEEIGGLKELFRMLDADSSGTITLDELKEGLKRVGSELMESEIKDLMDAADVDNNGTLDYGEFIAATVHLNKLEREENLLSAFSYFDKDGSGYITIDEIQVACKEFGLDDIHIDEMVKEIDQDNDGQIDYGEFAAMMRKGNGGMGRRTMTSRLNFRNALGIIGNGSN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1314 493 Gene3D - 326 397 - -
Psa5g1314 493 Pfam EF-hand domain pair 403 464 IPR002048 GO:0005509
Psa5g1314 493 Pfam EF-hand domain pair 333 393 IPR002048 GO:0005509
Psa5g1314 493 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Psa5g1314 493 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1314 493 SUPERFAMILY EF-hand 324 465 IPR011992 -
Psa5g1314 493 ProSitePatterns Protein kinases ATP-binding region signature. 33 61 IPR017441 GO:0005524
Psa5g1314 493 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1314 493 Gene3D - 398 492 - -
Psa5g1314 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Psa5g1314 493 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
Psa5g1314 493 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Psa5g1314 493 ProSitePatterns EF-hand calcium-binding domain. 341 353 IPR018247 -
Psa5g1314 493 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Psa5g1314 493 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 476 - -
Psa5g1314 493 PANTHER CDPK-RELATED KINASE 8 476 - -
Psa5g1314 493 SUPERFAMILY Protein kinase-like (PK-like) 7 308 IPR011009 -
Psa5g1314 493 CDD STKc_CAMK 27 284 - -
Psa5g1314 493 Gene3D Phosphorylase Kinase; domain 1 29 113 - -
Psa5g1314 493 ProSiteProfiles EF-hand calcium-binding domain profile. 328 363 IPR002048 GO:0005509
Psa5g1314 493 Pfam Protein kinase domain 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1314 493 SMART efh_1 332 360 IPR002048 GO:0005509
Psa5g1314 493 SMART efh_1 368 396 IPR002048 GO:0005509
Psa5g1314 493 SMART efh_1 404 432 IPR002048 GO:0005509
Psa5g1314 493 SMART efh_1 438 466 IPR002048 GO:0005509
Psa5g1314 493 ProSiteProfiles EF-hand calcium-binding domain profile. 438 469 IPR002048 GO:0005509
Psa5g1314 493 Gene3D Transferase(Phosphotransferase) domain 1 114 325 - -
Psa5g1314 493 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1314 Psa-Chr5 102329779 102333636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1314 1 493 EF-hand Containing Proteins AT1G35670 74.747 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa5g1314 Pkinase 2.9e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1314 K13412 - gmx:100790443 897.116