Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g1302 | ATGAATAATAGGAGAGAATCATGGGAGGAAGAGGGAAAAGAAGATGAGAATTTGTTTCCAGTGTATTCTGAAAGGTCACAGCAAGATATGTCAGCCATAGTTTCTGCACTGACACAAGTCATGGGAGGTAACAACAACAATGAACTTCAAGAAGCTTCCTCAATCCATAATATTAATGAACAATCTCAACAACCACAACAAGATCAAGGGAGTGAAAGAAAGAGACACTATAGAGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCTGCAGAGATTCGCGATCCGAAGAAGGCGGCAAGAGTATGGCTTGGAACTTTTGAAACTGCTGAGGCTGCAGCTGTTGCCTATGATGAAGCTGCACTTAGATTCAAAGGAAGCAAAGCTAAGCTCAATTTTCCTGAAAGAGTTCAAAGTTCAGCAGAATTTGGATTTCATCATTTTGTTTCATCCACAAATAACCAGCAACAGTCTAACTCAGTTCCTCTTCCACACTTTTCTCAAGAAGCATATTCAAATCCTTATCAATATGCTGCTGCACAAGCGCAACTTCAAGGTGGTGGTGGTAGCAACTTCAATCAGGACATGCTTCGTTATTATGGGGGAGACATGTATGTTTCTAATCCTCAGCACTTATCATCTACATCTCCGTCTTCGTCTTCATCCTCGGCTTCTGGATTATCTCAGCAGCAACAAGAGTTTCTGAGATTGTCTATGCAATTTGGAGGTTCTTCTTCCGCTTCTCAGCCACCAAGGAATTGGAGAGATGACATGGATGGGAGACACTAA | 786 | 0.4249 | MNNRRESWEEEGKEDENLFPVYSERSQQDMSAIVSALTQVMGGNNNNELQEASSIHNINEQSQQPQQDQGSERKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAVAYDEAALRFKGSKAKLNFPERVQSSAEFGFHHFVSSTNNQQQSNSVPLPHFSQEAYSNPYQYAAAQAQLQGGGGSNFNQDMLRYYGGDMYVSNPQHLSSTSPSSSSSSASGLSQQQQEFLRLSMQFGGSSSASQPPRNWRDDMDGRH* | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g1302 | 261 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Psa5g1302 | 261 | MobiDBLite | consensus disorder prediction | 210 | 261 | - | - | |
Psa5g1302 | 261 | ProSiteProfiles | AP2/ERF domain profile. | 76 | 133 | IPR001471 | GO:0003700|GO:0006355 | |
Psa5g1302 | 261 | MobiDBLite | consensus disorder prediction | 44 | 82 | - | - | |
Psa5g1302 | 261 | MobiDBLite | consensus disorder prediction | 210 | 251 | - | - | |
Psa5g1302 | 261 | MobiDBLite | consensus disorder prediction | 44 | 68 | - | - | |
Psa5g1302 | 261 | PRINTS | Ethylene responsive element binding protein signature | 77 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Psa5g1302 | 261 | PRINTS | Ethylene responsive element binding protein signature | 99 | 115 | IPR001471 | GO:0003700|GO:0006355 | |
Psa5g1302 | 261 | PANTHER | DNA-BINDING DOMAIN | 23 | 243 | IPR044808 | GO:0003700|GO:0009873 | |
Psa5g1302 | 261 | Gene3D | AP2/ERF domain | 75 | 135 | IPR036955 | GO:0003700|GO:0006355 | |
Psa5g1302 | 261 | SUPERFAMILY | DNA-binding domain | 76 | 134 | IPR016177 | GO:0003677 | |
Psa5g1302 | 261 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Psa5g1302 | 261 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 23 | 243 | - | - | |
Psa5g1302 | 261 | CDD | AP2 | 76 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Psa5g1302 | 261 | SMART | rav1_2 | 76 | 139 | IPR001471 | GO:0003700|GO:0006355 | |
Psa5g1302 | 261 | Pfam | AP2 domain | 76 | 125 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g1302 | Psa-Chr5 | 100097638 | 100098593 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g1302 | 17 | 167 | AP2-EREBP Transcription Factor Family | AT5G61890 | 58.385 | 2.00e-56 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Psa5g1302 | AP2 | 4.2e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g1302 | - | - | gmx:100787091 | 254.603 |