Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1294 ATGGCAGACTCATTTCTCTTCGATGTTGCAGATTCACTCCTAGGAAAACTTGCTTCTTATGCTCATGAAGAAGTTTCAAAAGCTTGGGCCGTGTTTGGAGATCTACAAGGGATCAAAGACACTTTGACTATTGTCAAATATGTACTACTCGATGCTGAAAATAAGAAAGACCAAAATCACGGGCTACAAGAATGGTTGAAGCAAATTCAAAACATCTTCTATGATGCCGAAGATGTGTTGGATGAAGTTCAGTGTCAAGAGTCGCGAAACCAATTTGTTCAAGCTTCTGGAAGCAAGAGGTTGAAGGTAAAACACTTCTTTTCTTCTCCTTTTTTTCGTCTTAGAATTTCTCATCGAATCAAAGATGTTAGAGATAGATTGAATAAGGTAGTTGCTGATCGGAATCTGTTTGGACTTGAGAGAATGGATGTTAATGTTAGTGAGGAAAGTAGAGAAATGAGTTATTCTCATGTTGATGCTTTAGATGTTATAGGAAGGGGTACTGAAAAGGAAGAAATTATCGAGCTTTTGATGAAATGCGGCGGTGAGGATGGTGATAAAGGACTGTCTGTGATTCCTATGGTGGGAATTGGTGGTTTGGGGAAGACCACACTTGCGAAGTTGGTCTTCAATGATAAGAGGATGGATGAAGTTTTCGAATTGAAAATGTGGGTGTGTGTCTCTTATGATTTTGACATTAGGAAGATAATTATTAAAATCATTAACTCGACTTCAACACATACGCCGGTTTTAGCTCTTGCTCGCCAAGAAAACATTGACCACTTTGATACGGAGCAGCTAGTGCGTCGTCTTAGAGAGAAGCTTTCTGATCAAAAGTTTTTACTAGTTTTAGATGATATATGGAATGTTAACCATTCAAAATGGGTTGAGTTGAAAGATTTGATAAAAGTTGGCGCATTAGGAAGCAAAGTTTTAGTCACAACACGAAGTTTGTCTATTGCTTCAATGATGGGAACGGTTCCTGTGTATACTTTAGAAGGTCTTTCTTTGGTTAACTGTTTGTCTCTCTTTGTCAAATGGGCATTTAAAGAAGGCGAAGAAAAGAAGTATCCACGTCTATTGGAGATTGGAGAAGATATGGTGAGAAAATGCCGAGGGATTCCATTAGCAGCGAGAACGTTGGGAAGTTCATTGTTCTCAAAATTTGATTTAGATAAGTGGGAGCTTGTAAGAGACTCCGAAATATGGAATTTAAGACAAAACAAAGATGATATTTTACCTGTGCTTAAGTTAAGCTATGATCAAATGCCATCCCATTTGAGACATTGTTTTGCTTATTTTTCCCTTTTTCCAAAAGATTATCTCTTTTCTTGTGGTGAAATTTGTAATCTCTGGGATGTTTTTGGATTACTTCAATCACCAAATGGAAGTCAAAAGCTAGAGAATATTTCAAGAGATTATATTGATGAGTTACATTCAAGATCATTTCTTCAAGATTTTGAAGACTTTGGCCATACGTGTGTTTTCAAAGTACATGATTTGGTGCATGATCTTGCGGTGTATGTTGCAAAAGAGGGGTTTGTAATGTTAAACTCTGATACTAAGAATATTCCTGAGCATGCAAGGCATTTATCAGTTGTTGAAAATGAGTCACTTGGTCGCACTTTGTTCACCGATTCGAAAAGTGTGAGAAGTATTTTGTTTCCCATCCAAGGAGTAGGTCTTGATAGTGAAACACTCTTGGATTCATGGATATCAAGATATAGATACCTGCGTTATTTAGATTTAAGTGATTCTTCATTTGAGGCCCTTCCGAATTCGATTTCTAAATTGGACCTTCTTCGAGTTCTCATTCTTTCTGGTAACACCAAAATCAAAATACTTCCCGGTTGTATATGTGAACTCCAAAATTTACAAGTGTTGTCAGTCAGAGGATGCACAGAGCTTGAAGCATTGCCTAAAGGACTAGGGAAGCTAATCAACCTTCGACAGTTGTTTATAACAACAAAGCAATTTCTTCTGTCACATGATGAATTTAAAAGCATGATCCATCTTCAAACTTTGGGTTTTCATTATTGTGAGAATTTGAAGTTTTTTTCCATTCCTGCACAACAACTCACTTCCCTTGAATCATTGTTTGTTCAATCATGCGGGAGCCTAGATTCTTTGCCGCTTTATATTTTCCCAAAATTACAAACTCTTTTAATTTTAAACTGTAAGTTGTTAAATCCATGGTTGAATGATGAAAGCCTTATCACAAACTCGAGCTCGATGAAACATCTATATCTCGGGGATTTCCCAAATGCTTTGACATTGCCTCATTGGATTGTAGGTGCTGCAAACACATTACTTTCCTTGGTAATTAAAAATCTTCCAAACCTTACTATGCTTCCCGAATTTTTAACAACCATGACTTGTCTTAAGAGGCTTCATATTGTGGATTGTCCTCAATTGTCGAGACTTCCAACTGACATCCATCGCCTGGTTGTCCTTGAAGATTTGAGCATAGACGGTTGTCCTGAATTATGCAGAAAATGTCAGCCTCGAGTTGGTGAGTACTGGCCCGTGATTTCTCATGTCAAACACGTTTTCATTGGAGAACCAAAAGGAGAGGAGAATTGA 2583 0.3755 MADSFLFDVADSLLGKLASYAHEEVSKAWAVFGDLQGIKDTLTIVKYVLLDAENKKDQNHGLQEWLKQIQNIFYDAEDVLDEVQCQESRNQFVQASGSKRLKVKHFFSSPFFRLRISHRIKDVRDRLNKVVADRNLFGLERMDVNVSEESREMSYSHVDALDVIGRGTEKEEIIELLMKCGGEDGDKGLSVIPMVGIGGLGKTTLAKLVFNDKRMDEVFELKMWVCVSYDFDIRKIIIKIINSTSTHTPVLALARQENIDHFDTEQLVRRLREKLSDQKFLLVLDDIWNVNHSKWVELKDLIKVGALGSKVLVTTRSLSIASMMGTVPVYTLEGLSLVNCLSLFVKWAFKEGEEKKYPRLLEIGEDMVRKCRGIPLAARTLGSSLFSKFDLDKWELVRDSEIWNLRQNKDDILPVLKLSYDQMPSHLRHCFAYFSLFPKDYLFSCGEICNLWDVFGLLQSPNGSQKLENISRDYIDELHSRSFLQDFEDFGHTCVFKVHDLVHDLAVYVAKEGFVMLNSDTKNIPEHARHLSVVENESLGRTLFTDSKSVRSILFPIQGVGLDSETLLDSWISRYRYLRYLDLSDSSFEALPNSISKLDLLRVLILSGNTKIKILPGCICELQNLQVLSVRGCTELEALPKGLGKLINLRQLFITTKQFLLSHDEFKSMIHLQTLGFHYCENLKFFSIPAQQLTSLESLFVQSCGSLDSLPLYIFPKLQTLLILNCKLLNPWLNDESLITNSSSMKHLYLGDFPNALTLPHWIVGAANTLLSLVIKNLPNLTMLPEFLTTMTCLKRLHIVDCPQLSRLPTDIHRLVVLEDLSIDGCPELCRKCQPRVGEYWPVISHVKHVFIGEPKGEEN* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1294 860 Pfam NB-ARC domain 169 421 IPR002182 GO:0043531
Psa5g1294 860 Gene3D - 335 419 IPR042197 -
Psa5g1294 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 433 IPR027417 -
Psa5g1294 860 Gene3D - 10 126 - -
Psa5g1294 860 Pfam Rx N-terminal domain 11 98 IPR041118 -
Psa5g1294 860 Gene3D Ribonuclease Inhibitor 736 837 IPR032675 -
Psa5g1294 860 CDD RX-CC_like 9 130 IPR038005 -
Psa5g1294 860 Gene3D - 148 327 IPR027417 -
Psa5g1294 860 Gene3D - 420 508 IPR036388 -
Psa5g1294 860 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 7 746 - -
Psa5g1294 860 PRINTS Disease resistance protein signature 191 206 - -
Psa5g1294 860 PRINTS Disease resistance protein signature 274 288 - -
Psa5g1294 860 PRINTS Disease resistance protein signature 371 385 - -
Psa5g1294 860 PRINTS Disease resistance protein signature 620 636 - -
Psa5g1294 860 SUPERFAMILY L domain-like 497 851 - -
Psa5g1294 860 PANTHER DISEASE RESISTANCE PROTEIN RP 7 746 IPR044974 GO:0006952
Psa5g1294 860 Pfam Leucine rich repeat 577 633 IPR001611 GO:0005515
Psa5g1294 860 Gene3D Ribonuclease Inhibitor 518 730 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1294 Psa-Chr5 99768471 99771735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1294 196 829 WRKY Transcription Factor Family AT5G45050 22.156 6.80e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1294 - - gmx:100794422 1073.92