Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1275 ATGTTAAATGAGCAACAACACCGCCGTGAATCATCCGGGCAACAACACCGCCGTGAATCATCCGGGCAACAACACCGCCGTGAATCACCTGGGCAACAACACCGCCGCGAAGCATCCGGGCAACAATACCGCCGTGAAGCATTCGGGCAACAACACCTAGCCGTGAATCATCCGGGCAACAACACCGCCGTGAATCACCTGGGCAACAACACCGCCGCGAAGCATCCGGGCAACAATACCGCCGTGAAGCATTCGGGCAACAACACCTGCGTGAAGCACCTGAGCAACAACACCTGCGTGAAGCATCCGGGCAACAACACCTGCGTGAAGCACCTGAGCAACAACACTGCCGATAAAGACCAAATCCAGTCGAACCTAACCGTTACTCAGTGGCTTCAATCAGTTCGCAAACGCACTTCCAATTCCGGTTTCCCTCGCTCTTCTTCTACCATACCCTTTTGTGTGGGAGATTCTGTAGAGGATGCAGAAATTGATATGCTTCCTGATCAAACTCAAATTAGCGTGTGGGATAGGCTTGGTAAAGCAGAAATGTTGGACATTGAATCCAGTTCCTTTACTTGGGACATGCTCTCTTCACTATACCATACCGAGCACACCAGTAGCAATGAACATTCTGAGGATGAAATGAATAGAGCTCTTGAGATCACAGTAAATTCTGGAGGGGTTGTCTTCTTTGCTCTTTTCAATTCTGAACGACTTGGATATGAATTCGCCAAATGGTTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAGTTTAGAATGGCTCCAAATAAAGAAAGCTGCAGAAAAAGCAAAGGATGCAGCAATTTGTGAGAGTGCTGTAATTGGTGAAACGACCTGCTCTGAACTTTTGGAAGCACTCGAGCTTAGCCGTTGTCTCTTGTTTATGAGGTACAACTCAAATCTAGTGTTCATATTTTATGTACATGGCTCACCTTTACTTGAAAGCTCTAGCACATTTGAATCAAGGGATTCTGCAAAAAGAACGTCTGCAGCCCTTGGCAGAGTAATGATGTTAGATCTTGTTATCAGAAATGAAGATAGGCTTTCATGCCGTCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGAAAAAGCAATCCCTTCAAATTTAGATACAATAGGAGAAACCTTTAATTTAACAATGAATCGATATCGCTCCAACATTGTGTCTATTGACTCTGGTGTTCCACGTCGACCTCCTGCTGTAAAACGTGCAGATGATCAGGTCACCTATCCTAAGTTGGTTGAGTTGGTACTAAATAGCTCTGAGTTTTCTTCTTTCCTGTTACATGATATAACCGGAGGAAAATTAGGAAGACCTCCCTTAGAAGATATAACATTAACCTTTGACGTACAATCAATAGTTCACGAGTTCCGTAGTGGCTTCCGTGCTGCTCTTAGGGATTTGCAAGGATTTCATGTATTCTTACTTACACTTCACCCAAAACTTGATAACTTGTTACGATCATTTGATAATACTATAAGCAAAATATCACTTAGAGAGTCTGAAAAGGAAGATTCACCTTCACCTGTTAGTAGTAGTTGTCTCTCTCCAACACGAAAGGATAGATTTTCTAATGATAGCCATCGAGATTTTGGTAATTCATATTCTCAGAGATCAGTTCCAAGGGCATTGCTATCCTCTGGCAATAGAAATTTTTGTGACTCTACTTCTCCTATGTCAAGAGAAGGTTGCCATGGAAAATCCTCCAAAGGGAGTGTGGAGCCGTGGCATGATTCCCATTTTACATCTAAGCTCCGTGATTTCCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTAGAACATTGGAGTGAAATGCTCAAAAATGATGCTATCAAGTTGTGCCAGGAGAACAATTTCAATTCAGGATTTTTGGAAGGAAGTGATAACAACACTGTTGTTGATGCATATGAATTGAAGATCAGACTAGAGCATATCCTTGAAAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCGTCTACTATTACAAATTATTTGTTCATCGGTGGAGTACTATCTGCAAGATCTATATGCACAATGCAACACTTAGCAATCACTCATATTTTGTGTCTGTGTACTGACGAAATTGGACAATCAGATTCTCAACTTCCTGATCTATTCACTTACAAAAATTTATTTGTATGTGACACTGAGAATTCTAACATCAGCATCTTATTTGAAGAAGCTTGTGATTTTATAGAAGATGTTGAGAGAGCGGGTCAGAGAATTCTAGTTCATTGTTTTGAAGGGAAAAGCAGAAGTGTCACTGTAGTCCTTGCTTACCTGATGCTAAGAAAGAATTTCACATTATTAGAAGCATGGAATGTTGTGAAAAAAGTTCACCGTCGAGCACAGCCAAATGATGGTTTTGGAAAGATCTTACAGGAACTTGATCAAAAACTGCACGAGAAGGTTTCAATGGAGTGGCGGCGGCGACAGAGACCAACATTGAAAGTTTGTCCAATATGTTGCAAGAATGTTGGACTGAGCAGCAGCTCACTTCAGAAATCACATAATAGACTATCATCAGGGAGTGTAGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATCAGCCATGGTGGGAATGTAAGCCCCACACACAGACAATCTCATTCAGTGACAGATTAA 2709 0.4205 MLNEQQHRRESSGQQHRRESSGQQHRRESPGQQHRREASGQQYRREAFGQQHLAVNHPGNNTAVNHLGNNTAAKHPGNNTAVKHSGNNTCVKHLSNNTCVKHPGNNTCVKHLSNNTADKDQIQSNLTVTQWLQSVRKRTSNSGFPRSSSTIPFCVGDSVEDAEIDMLPDQTQISVWDRLGKAEMLDIESSSFTWDMLSSLYHTEHTSSNEHSEDEMNRALEITVNSGGVVFFALFNSERLGYEFAKWLGVQTPQARVIHNTSLEWLQIKKAAEKAKDAAICESAVIGETTCSELLEALELSRCLLFMRYNSNLVFIFYVHGSPLLESSSTFESRDSAKRTSAALGRVMMLDLVIRNEDRLSCRQLRWRGNPANLLLAEKAIPSNLDTIGETFNLTMNRYRSNIVSIDSGVPRRPPAVKRADDQVTYPKLVELVLNSSEFSSFLLHDITGGKLGRPPLEDITLTFDVQSIVHEFRSGFRAALRDLQGFHVFLLTLHPKLDNLLRSFDNTISKISLRESEKEDSPSPVSSSCLSPTRKDRFSNDSHRDFGNSYSQRSVPRALLSSGNRNFCDSTSPMSREGCHGKSSKGSVEPWHDSHFTSKLRDFHKFAKVDAESYKELEHWSEMLKNDAIKLCQENNFNSGFLEGSDNNTVVDAYELKIRLEHILERIALISEAANTERPSTITNYLFIGGVLSARSICTMQHLAITHILCLCTDEIGQSDSQLPDLFTYKNLFVCDTENSNISILFEEACDFIEDVERAGQRILVHCFEGKSRSVTVVLAYLMLRKNFTLLEAWNVVKKVHRRAQPNDGFGKILQELDQKLHEKVSMEWRRRQRPTLKVCPICCKNVGLSSSSLQKSHNRLSSGSVDSAMTMEIQKALTTLNISHGGNVSPTHRQSHSVTD* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1275 902 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 237 402 - -
Psa5g1275 902 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 402 902 - -
Psa5g1275 902 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 126 237 - -
Psa5g1275 902 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 748 800 IPR000387 GO:0016311|GO:0016791
Psa5g1275 902 MobiDBLite consensus disorder prediction 1 42 - -
Psa5g1275 902 Pfam Actin-fragmin kinase, catalytic 173 394 IPR015275 -
Psa5g1275 902 MobiDBLite consensus disorder prediction 1 43 - -
Psa5g1275 902 Pfam Dual specificity phosphatase, catalytic domain 694 819 IPR000340 GO:0008138|GO:0016311
Psa5g1275 902 SMART dsp_5 679 821 IPR020422 GO:0006470|GO:0008138
Psa5g1275 902 MobiDBLite consensus disorder prediction 883 902 - -
Psa5g1275 902 MobiDBLite consensus disorder prediction 514 536 - -
Psa5g1275 902 Gene3D - 323 449 IPR036940 GO:0016301
Psa5g1275 902 Gene3D Protein tyrosine phosphatase superfamily 662 835 IPR029021 -
Psa5g1275 902 CDD DSP 680 817 - -
Psa5g1275 902 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 237 402 IPR035010 GO:0004721|GO:0009737|GO:0043622
Psa5g1275 902 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 126 237 IPR035010 GO:0004721|GO:0009737|GO:0043622
Psa5g1275 902 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 402 902 IPR035010 GO:0004721|GO:0009737|GO:0043622
Psa5g1275 902 SUPERFAMILY Protein kinase-like (PK-like) 130 423 IPR011009 -
Psa5g1275 902 ProSiteProfiles Dual specificity protein phosphatase domain profile. 679 824 IPR020422 GO:0006470|GO:0008138
Psa5g1275 902 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 679 824 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1275 Psa-Chr5 98393527 98398485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1275 402 887 Protein tyrosine phosphatase (PTP) family AT5G23720 59.841 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1275 K14165 - gmx:102661225 1034.63