Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g1275 | ATGTTAAATGAGCAACAACACCGCCGTGAATCATCCGGGCAACAACACCGCCGTGAATCATCCGGGCAACAACACCGCCGTGAATCACCTGGGCAACAACACCGCCGCGAAGCATCCGGGCAACAATACCGCCGTGAAGCATTCGGGCAACAACACCTAGCCGTGAATCATCCGGGCAACAACACCGCCGTGAATCACCTGGGCAACAACACCGCCGCGAAGCATCCGGGCAACAATACCGCCGTGAAGCATTCGGGCAACAACACCTGCGTGAAGCACCTGAGCAACAACACCTGCGTGAAGCATCCGGGCAACAACACCTGCGTGAAGCACCTGAGCAACAACACTGCCGATAAAGACCAAATCCAGTCGAACCTAACCGTTACTCAGTGGCTTCAATCAGTTCGCAAACGCACTTCCAATTCCGGTTTCCCTCGCTCTTCTTCTACCATACCCTTTTGTGTGGGAGATTCTGTAGAGGATGCAGAAATTGATATGCTTCCTGATCAAACTCAAATTAGCGTGTGGGATAGGCTTGGTAAAGCAGAAATGTTGGACATTGAATCCAGTTCCTTTACTTGGGACATGCTCTCTTCACTATACCATACCGAGCACACCAGTAGCAATGAACATTCTGAGGATGAAATGAATAGAGCTCTTGAGATCACAGTAAATTCTGGAGGGGTTGTCTTCTTTGCTCTTTTCAATTCTGAACGACTTGGATATGAATTCGCCAAATGGTTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAGTTTAGAATGGCTCCAAATAAAGAAAGCTGCAGAAAAAGCAAAGGATGCAGCAATTTGTGAGAGTGCTGTAATTGGTGAAACGACCTGCTCTGAACTTTTGGAAGCACTCGAGCTTAGCCGTTGTCTCTTGTTTATGAGGTACAACTCAAATCTAGTGTTCATATTTTATGTACATGGCTCACCTTTACTTGAAAGCTCTAGCACATTTGAATCAAGGGATTCTGCAAAAAGAACGTCTGCAGCCCTTGGCAGAGTAATGATGTTAGATCTTGTTATCAGAAATGAAGATAGGCTTTCATGCCGTCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGAAAAAGCAATCCCTTCAAATTTAGATACAATAGGAGAAACCTTTAATTTAACAATGAATCGATATCGCTCCAACATTGTGTCTATTGACTCTGGTGTTCCACGTCGACCTCCTGCTGTAAAACGTGCAGATGATCAGGTCACCTATCCTAAGTTGGTTGAGTTGGTACTAAATAGCTCTGAGTTTTCTTCTTTCCTGTTACATGATATAACCGGAGGAAAATTAGGAAGACCTCCCTTAGAAGATATAACATTAACCTTTGACGTACAATCAATAGTTCACGAGTTCCGTAGTGGCTTCCGTGCTGCTCTTAGGGATTTGCAAGGATTTCATGTATTCTTACTTACACTTCACCCAAAACTTGATAACTTGTTACGATCATTTGATAATACTATAAGCAAAATATCACTTAGAGAGTCTGAAAAGGAAGATTCACCTTCACCTGTTAGTAGTAGTTGTCTCTCTCCAACACGAAAGGATAGATTTTCTAATGATAGCCATCGAGATTTTGGTAATTCATATTCTCAGAGATCAGTTCCAAGGGCATTGCTATCCTCTGGCAATAGAAATTTTTGTGACTCTACTTCTCCTATGTCAAGAGAAGGTTGCCATGGAAAATCCTCCAAAGGGAGTGTGGAGCCGTGGCATGATTCCCATTTTACATCTAAGCTCCGTGATTTCCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTAGAACATTGGAGTGAAATGCTCAAAAATGATGCTATCAAGTTGTGCCAGGAGAACAATTTCAATTCAGGATTTTTGGAAGGAAGTGATAACAACACTGTTGTTGATGCATATGAATTGAAGATCAGACTAGAGCATATCCTTGAAAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCGTCTACTATTACAAATTATTTGTTCATCGGTGGAGTACTATCTGCAAGATCTATATGCACAATGCAACACTTAGCAATCACTCATATTTTGTGTCTGTGTACTGACGAAATTGGACAATCAGATTCTCAACTTCCTGATCTATTCACTTACAAAAATTTATTTGTATGTGACACTGAGAATTCTAACATCAGCATCTTATTTGAAGAAGCTTGTGATTTTATAGAAGATGTTGAGAGAGCGGGTCAGAGAATTCTAGTTCATTGTTTTGAAGGGAAAAGCAGAAGTGTCACTGTAGTCCTTGCTTACCTGATGCTAAGAAAGAATTTCACATTATTAGAAGCATGGAATGTTGTGAAAAAAGTTCACCGTCGAGCACAGCCAAATGATGGTTTTGGAAAGATCTTACAGGAACTTGATCAAAAACTGCACGAGAAGGTTTCAATGGAGTGGCGGCGGCGACAGAGACCAACATTGAAAGTTTGTCCAATATGTTGCAAGAATGTTGGACTGAGCAGCAGCTCACTTCAGAAATCACATAATAGACTATCATCAGGGAGTGTAGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATCAGCCATGGTGGGAATGTAAGCCCCACACACAGACAATCTCATTCAGTGACAGATTAA | 2709 | 0.4205 | MLNEQQHRRESSGQQHRRESSGQQHRRESPGQQHRREASGQQYRREAFGQQHLAVNHPGNNTAVNHLGNNTAAKHPGNNTAVKHSGNNTCVKHLSNNTCVKHPGNNTCVKHLSNNTADKDQIQSNLTVTQWLQSVRKRTSNSGFPRSSSTIPFCVGDSVEDAEIDMLPDQTQISVWDRLGKAEMLDIESSSFTWDMLSSLYHTEHTSSNEHSEDEMNRALEITVNSGGVVFFALFNSERLGYEFAKWLGVQTPQARVIHNTSLEWLQIKKAAEKAKDAAICESAVIGETTCSELLEALELSRCLLFMRYNSNLVFIFYVHGSPLLESSSTFESRDSAKRTSAALGRVMMLDLVIRNEDRLSCRQLRWRGNPANLLLAEKAIPSNLDTIGETFNLTMNRYRSNIVSIDSGVPRRPPAVKRADDQVTYPKLVELVLNSSEFSSFLLHDITGGKLGRPPLEDITLTFDVQSIVHEFRSGFRAALRDLQGFHVFLLTLHPKLDNLLRSFDNTISKISLRESEKEDSPSPVSSSCLSPTRKDRFSNDSHRDFGNSYSQRSVPRALLSSGNRNFCDSTSPMSREGCHGKSSKGSVEPWHDSHFTSKLRDFHKFAKVDAESYKELEHWSEMLKNDAIKLCQENNFNSGFLEGSDNNTVVDAYELKIRLEHILERIALISEAANTERPSTITNYLFIGGVLSARSICTMQHLAITHILCLCTDEIGQSDSQLPDLFTYKNLFVCDTENSNISILFEEACDFIEDVERAGQRILVHCFEGKSRSVTVVLAYLMLRKNFTLLEAWNVVKKVHRRAQPNDGFGKILQELDQKLHEKVSMEWRRRQRPTLKVCPICCKNVGLSSSSLQKSHNRLSSGSVDSAMTMEIQKALTTLNISHGGNVSPTHRQSHSVTD* | 903 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g1275 | 902 | PANTHER | DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN | 237 | 402 | - | - | |
Psa5g1275 | 902 | PANTHER | DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN | 402 | 902 | - | - | |
Psa5g1275 | 902 | PANTHER | DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN | 126 | 237 | - | - | |
Psa5g1275 | 902 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 748 | 800 | IPR000387 | GO:0016311|GO:0016791 | |
Psa5g1275 | 902 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Psa5g1275 | 902 | Pfam | Actin-fragmin kinase, catalytic | 173 | 394 | IPR015275 | - | |
Psa5g1275 | 902 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Psa5g1275 | 902 | Pfam | Dual specificity phosphatase, catalytic domain | 694 | 819 | IPR000340 | GO:0008138|GO:0016311 | |
Psa5g1275 | 902 | SMART | dsp_5 | 679 | 821 | IPR020422 | GO:0006470|GO:0008138 | |
Psa5g1275 | 902 | MobiDBLite | consensus disorder prediction | 883 | 902 | - | - | |
Psa5g1275 | 902 | MobiDBLite | consensus disorder prediction | 514 | 536 | - | - | |
Psa5g1275 | 902 | Gene3D | - | 323 | 449 | IPR036940 | GO:0016301 | |
Psa5g1275 | 902 | Gene3D | Protein tyrosine phosphatase superfamily | 662 | 835 | IPR029021 | - | |
Psa5g1275 | 902 | CDD | DSP | 680 | 817 | - | - | |
Psa5g1275 | 902 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 | 237 | 402 | IPR035010 | GO:0004721|GO:0009737|GO:0043622 | |
Psa5g1275 | 902 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 | 126 | 237 | IPR035010 | GO:0004721|GO:0009737|GO:0043622 | |
Psa5g1275 | 902 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 | 402 | 902 | IPR035010 | GO:0004721|GO:0009737|GO:0043622 | |
Psa5g1275 | 902 | SUPERFAMILY | Protein kinase-like (PK-like) | 130 | 423 | IPR011009 | - | |
Psa5g1275 | 902 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 679 | 824 | IPR020422 | GO:0006470|GO:0008138 | |
Psa5g1275 | 902 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 679 | 824 | IPR029021 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g1275 | Psa-Chr5 | 98393527 | 98398485 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g1275 | 402 | 887 | Protein tyrosine phosphatase (PTP) family | AT5G23720 | 59.841 | 0.0 | 580 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g1275 | K14165 | - | gmx:102661225 | 1034.63 |