Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1274 ATGTCAAATGAGCAACAAAACCAATACCCTGAAGCACAAAACCAGGATAAAGAGCCATTCGAGTCTGAGGGACCATCGCCCCTAACCGTTACTTCCCGGGTTTTGTATATGCTGGGAGACATTACTCATTGGCTTCAATCCGTTCGAAAACGCACTTCCAATTACCGCTCCTCCGGTTTCCCTCGCTCTTCTTCCACCATACCCTTTTGTTTGGGAGAATCCGCAGAGGATGCAGAAATTGATATGCTTCCTGATCAAATTGAAAATAGCGTGTGGGATAGGCTTGGTAAAGCAGAAATGCTGGATATTGAATCGAGTTCCTTTACTTGGGACATGCTCTCTTCACTTCACCATACTGAGCACACCTGTAGCAATGAACATCCCGAGGATGAAATTAATAGAGCTCTTGAGATGACAGTAAATTCTGGAGGGGTTGTCTTCTTTTCCCTTTTCAATGTTGACGGGACCGATGCTGCTTCTCCAAAAGAAGCAGCAGCTGTCATAAAGATATCTTCGTCAAGAATGGCAACACAGTCTGAACGACTTGGATATGAATTCGCCAAATGGTTGGGAGTCCAAGCTCCACAGGCTAGAGTCATTCACAATAGCAGTTTAGAATGGCTCCAAATGAAGAAAGCTGCAGAAAAAGCAAGGGATGCAGCAACTTGTGAGAGTGATGTTATTGGTGAAACGACCTGTTCGGAACTTTTGGAAGCACTTGAGCTTAGCCGGTGTCTCTTGTTTATGAGTTATGTACATGGCTCACCTTTACTTGAAAGCTCTAGCGCATTTGAATCAAGGGATTCTGCGGAAAGAACGTCAGCCGCGCTTGGCAGGGTAATGATGCTAGATCTTGTTATTAGAAATGAAGATAGACTTCCATGCCGTCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGAAAAAGCAATCCCTTCAAATTTAGATACAAAAGAAGAAGGCGTTGATTTGGTAATGAACCGATATGGGCCCGAGGTAGTTGGGACGTTGCAGAAAAAGAAAAGGTCCACTTCAAGATCGTGTTCTCATAATAATGAAATAAGATCACAAGGCTCTCATCTTTCACAGATAAGAGAGCCCTCTGATGACATGTGCCTTAAAAGTCAAACGTCAGAAGAATCGATGTTTACTGGTTCCGACATTGTGGCTATTGACTCGGGTGTTCCTCGTCGACCTCCTGCTGTAAAACGTGCAGATGATCAGGTCAGTTATCCTAAGTTGGTTGAGTTAGTACTAAATAGCTGTGAGTTTTCCTCTCGCCTCTTACATGATATAACAGGAGGGAAATTAGGAAGTCCTCCCTTAGAAGACATAAGTTTAACAATTGACATACAAGGGAGTTATGTAACATCAGTAGTTCACGAGTTCCGGAGTGGTTTCCGTGCTGCTCTTAGGGATCTGCAAGGATTTCATATATTCCTACTTACACTTCACCAAAAACTTGATAACTTGTTACGATCATTTAATAATACTATAAGCAAAATATCACTCGGGGAGTCTGAAAAGGAAGATTCACCTTCAGCTGCTACTGGTAGTTGTCTCTCTCCAACAAGAAAAGAGAGATTTTCTAATGATAGCCATCGAGATTTTAGTGATTCAGATTCACAAAGATCTGCTCCAAGGGCATTGTCATCTTCAGGCAATAGGAATTTTTGCGACTCTGCGTCTCCTATGTCAAGAGAAGGTTGCCATGGAAAATCTTCCAAAGGGAGTCTGGAGCCATTGCACGATTCTCATTTTACGGCTAAGCTCCGTGACTTCCATAAATTTGCCAAGATTGATGCAGAATCTTATAAAGAATTGGAACATTGGAATGAAATGCTTAAAAATGATGCTATCAAGTTATGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGAAGTGATAGCAACACTGTTGTTGATGCATATGAATTGAAGATCAGACTTGAACATATCCTTGAAAGAATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCTATTACAAATTATTTATTCATCGGTGGAGCGCTATCTGCAAGATCTATATACACAATGCAACACTTGGGAATCACTCATATCTTGTGTTTGTGTTCTAACGAAATTGGACAATCAGATTCTCAATTTCCAGATCTTTTCACTTACAAAAATTTCTTTGTATGTGACACTGAGAATTCTAACATTAGCATCTTATTTGAGGAAGCTTGTGATTTTATAGAAGATGTTGAGAGAGCGGGTCAGGGAATTCTAGTTCATTGTTTTGAAGGGAAAAGCAGAAGTGTCACTGTAGTCCTTGCTTACTTGATGCTAAGAAAGAAGTTGACATTATCAGAAGCATGGAATACTGTGAAAAAAGTTCACCGTCGAGCACAGCCGAATGACGGTTTCGGAAAGATCTTACAGGAACTTGATCAAAAACTGCATGGGAAGGTTTCAATGGAGTGGCGGCGGCGGAGACCAACAATGAAAGTTTGTCCAATATGTGGCAAGAATGCTGGACTGAGTAGCAGCTCACTTAAGCTCCATGTTCAGAAATCACATAAAAGACTATCATCAGGGAGTGTAGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATTAACCGTGGTGGGAGTGTGAGCCCCACACACAGGCTATCTCATTCAATGACAGATTAA 2697 0.4153 MSNEQQNQYPEAQNQDKEPFESEGPSPLTVTSRVLYMLGDITHWLQSVRKRTSNYRSSGFPRSSSTIPFCLGESAEDAEIDMLPDQIENSVWDRLGKAEMLDIESSSFTWDMLSSLHHTEHTCSNEHPEDEINRALEMTVNSGGVVFFSLFNVDGTDAASPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQAPQARVIHNSSLEWLQMKKAAEKARDAATCESDVIGETTCSELLEALELSRCLLFMSYVHGSPLLESSSAFESRDSAERTSAALGRVMMLDLVIRNEDRLPCRQLRWRGNPANLLLAEKAIPSNLDTKEEGVDLVMNRYGPEVVGTLQKKKRSTSRSCSHNNEIRSQGSHLSQIREPSDDMCLKSQTSEESMFTGSDIVAIDSGVPRRPPAVKRADDQVSYPKLVELVLNSCEFSSRLLHDITGGKLGSPPLEDISLTIDIQGSYVTSVVHEFRSGFRAALRDLQGFHIFLLTLHQKLDNLLRSFNNTISKISLGESEKEDSPSAATGSCLSPTRKERFSNDSHRDFSDSDSQRSAPRALSSSGNRNFCDSASPMSREGCHGKSSKGSLEPLHDSHFTAKLRDFHKFAKIDAESYKELEHWNEMLKNDAIKLCQENNFNSGFFEGSDSNTVVDAYELKIRLEHILERIALISEAANTERPSAITNYLFIGGALSARSIYTMQHLGITHILCLCSNEIGQSDSQFPDLFTYKNFFVCDTENSNISILFEEACDFIEDVERAGQGILVHCFEGKSRSVTVVLAYLMLRKKLTLSEAWNTVKKVHRRAQPNDGFGKILQELDQKLHGKVSMEWRRRRPTMKVCPICGKNAGLSSSSLKLHVQKSHKRLSSGSVDSAMTMEIQKALTTLNINRGGSVSPTHRLSHSMTD* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1274 898 MobiDBLite consensus disorder prediction 508 557 - -
Psa5g1274 898 CDD DSP 673 810 - -
Psa5g1274 898 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 741 793 IPR000387 GO:0016311|GO:0016791
Psa5g1274 898 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 17 898 IPR035010 GO:0004721|GO:0009737|GO:0043622
Psa5g1274 898 MobiDBLite consensus disorder prediction 1 15 - -
Psa5g1274 898 MobiDBLite consensus disorder prediction 352 370 - -
Psa5g1274 898 MobiDBLite consensus disorder prediction 345 370 - -
Psa5g1274 898 Pfam Actin-fragmin kinase, catalytic 89 312 IPR015275 -
Psa5g1274 898 MobiDBLite consensus disorder prediction 513 529 - -
Psa5g1274 898 Pfam Dual specificity phosphatase, catalytic domain 683 812 IPR000340 GO:0008138|GO:0016311
Psa5g1274 898 Gene3D Protein tyrosine phosphatase superfamily 655 826 IPR029021 -
Psa5g1274 898 ProSiteProfiles Dual specificity protein phosphatase domain profile. 672 817 IPR020422 GO:0006470|GO:0008138
Psa5g1274 898 MobiDBLite consensus disorder prediction 1 26 - -
Psa5g1274 898 MobiDBLite consensus disorder prediction 530 545 - -
Psa5g1274 898 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 672 817 IPR029021 -
Psa5g1274 898 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 17 898 - -
Psa5g1274 898 SUPERFAMILY Protein kinase-like (PK-like) 43 411 IPR011009 -
Psa5g1274 898 SMART dsp_5 672 814 IPR020422 GO:0006470|GO:0008138
Psa5g1274 898 Gene3D - 257 508 IPR036940 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1274 Psa-Chr5 98348574 98354625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1274 21 883 Protein tyrosine phosphatase (PTP) family AT5G23720 60.358 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1274 K14165 - gmx:102661225 1242.64