Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1273 ATGGCATTTCCTATCTTACTCCTTCATCTTACTTTTTTCACCTTCAACGTTTTCTCATCTCATTCTCATTCTCATGCAGACAGAATCATTTCCCTTCCTGGACAACCTCACAACATAGCCTTTCAACAATTCTCAGGCTATATCACCGTTGATAACAAAAACCACAAGTCACTTTTTTACTATTTTGCTGAATCAGAAACTGACCCTTCTTCAAAGCCTCTTGTTCTTTGGCTCAATGGTGGACCTGGTTGTTCTTCTCTTGGAGTTGGTGCATTCTCAGAAAATGGACCCTTCAGACCAAATGGTGAATTTCTTGTCAAAAATGAACATAGTTGGAACAAAGAGGCAAATATGCTGTATTTGGAGACACCGATTGGAGTTGGATTCTCTTATGCAAAAGGTAGTTCTGCATATACAACAACAGTGAATGATGAGGAAACAGCTAGGGACAATCTTGTATTCTTGGAACGCTGGTTTGATAAGTTTCCTCAATATAGAAACAGAGATTTGTTTCTAACTGGTGAAAGTTACGCAGGTCATTATGTTCCTCAACTTGCAAAGCTTATGATTGAAAGGAACAAAAGAAACAATGTATTCAATCTCAAAGGCATAGCTTTGGGGAATCCAGTTCTGGAATATGCAACTGATTTCAATTCAAGGGCTGAATTTTTTTGGTCACATGGACTGATATCTGATTCAACTTACAACATGTTCACTAGAGTGTGTAATTACTCGCGCTATGTTAGTGAGTACAATAGAGATTCAGTTTCATCTGTTTGTTCAAATGTTATGGGATTGGTGAGCAAAGAAACTAGTAGATTTGTGGATAAATATGATGTGACTCTTGATGTTTGTATTTCCTCTGTGCTGTCACAATCTAAGGTTATTTCTCCTCAACCTCAACAAGCAAATGAGATGGTAGATGTGTGTGTGGATGACAAGGTTACAAACTACTTAAACAGAAGAGATGTGCAAGAAGCACTTCATGCAAAGCTCGTCGGAGTTCGCAAGTGGGATGTATGCAGCAATGTTTTGGACTATGATGTGCTTAACTTGGAAGTGCCAACACTTCCTATTCTTGGATCACTGATAAGAGCTGGAATTAAGATCCTAATTTACAGTGGAGATCAAGACTCAGTAATTCCACTGACTGGAAGCAGAACCTTAGTTCAAAAATTGGCCAGACAAATAGGACTGAATACAACAGTCCCTTACAGAGTCTGGTTTGAAAGACAACAGGTTGGTGGATGGACTCAAGTGTATGGAAATATTCTGTCATTTGCCACAGTGAGAGGTGCTGCACATGAAGCTCCTTTCTCACAGCCAGAAAGATCACTCGTGCTATTCAAATCATTCTTGGAAGGAACTCCTTTGCCTGAAGTTTTCTGA 1389 0.3924 MAFPILLLHLTFFTFNVFSSHSHSHADRIISLPGQPHNIAFQQFSGYITVDNKNHKSLFYYFAESETDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLVKNEHSWNKEANMLYLETPIGVGFSYAKGSSAYTTTVNDEETARDNLVFLERWFDKFPQYRNRDLFLTGESYAGHYVPQLAKLMIERNKRNNVFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNMFTRVCNYSRYVSEYNRDSVSSVCSNVMGLVSKETSRFVDKYDVTLDVCISSVLSQSKVISPQPQQANEMVDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDVLNLEVPTLPILGSLIRAGIKILIYSGDQDSVIPLTGSRTLVQKLARQIGLNTTVPYRVWFERQQVGGWTQVYGNILSFATVRGAAHEAPFSQPERSLVLFKSFLEGTPLPEVF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1273 462 Gene3D - 356 455 - -
Psa5g1273 462 Gene3D - 310 346 - -
Psa5g1273 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
Psa5g1273 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Psa5g1273 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Psa5g1273 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Psa5g1273 462 Gene3D alpha/beta hydrolase 21 296 IPR029058 -
Psa5g1273 462 SUPERFAMILY alpha/beta-Hydrolases 29 459 IPR029058 -
Psa5g1273 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 460 IPR001563 GO:0004185|GO:0006508
Psa5g1273 462 Pfam Serine carboxypeptidase 33 455 IPR001563 GO:0004185|GO:0006508
Psa5g1273 462 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Psa5g1273 462 PANTHER CARBOXYPEPTIDASE 22 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1273 Psa-Chr5 98339169 98342770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1273 318 458 Calmodulin-binding Proteins AT2G22960 28.369 7.07e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1273 K16297 - gmx:100795668 799.66