Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1236 ATGGGTGGTATAAAGGGAGAATGTAAGAAGAATATGATAAAAATCCCCAAAGGTTGTTTTTCAGTTTATGTTGGATCTGAAAGACAAAGGTTTATTGTGAAGACAAAGTTTGTTGCACACCCATTATTCAAGATGTTACTTGATGAAGCAGAAGAGGAATTTGGGTTTCAAAATGATGGACCAATTAGGCTTCCATGTAACGTTGATTTGTTCTATAAAGTTTTGGCTGAAATGAATAATTTTGATGAAGAGGTTAATAAGATTAATGATGGTATTTTTAGAAGCTTTAACAAGGCTAAAAGGTTTTCATTATTTTGTTCTTCGAAACCAAAGCTATATGAATAA 345 0.3159 MGGIKGECKKNMIKIPKGCFSVYVGSERQRFIVKTKFVAHPLFKMLLDEAEEEFGFQNDGPIRLPCNVDLFYKVLAEMNNFDEEVNKINDGIFRSFNKAKRFSLFCSSKPKLYE* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1236 114 Pfam Auxin responsive protein 13 76 IPR003676 GO:0009733
Psa5g1236 114 PANTHER SMALL AUXIN-UP RNA-RELATED 14 91 - -
Psa5g1236 114 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1236 Psa-Chr5 95881009 95881859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1236 15 92 Calmodulin-binding Proteins AT3G43120 42.308 9.74e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1236 K14488 - gmx:100789525 119.398