Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1235 ATGGCAATGGAAAGTCGAGAAATCTCTACCAATGATCTTAATGTAAAGAGAGGAGAACCGATTCGAGTTCAACCGGCGGAAGAAACAGAAAACGGACTATATTTTCTTTCGAATCTGGACCAGAATATCGCGGTTCCAATGCGTACAATTTACTGCTTTAAATCAGAATCTAGAGGAAATGAAGAAGCTGGAGAAGTTATTAAGGATGCTTTGTCGAAGATTCTTGTTCCTTATTATCCTATGGCAGGGAAGTTGATTATAAGCTCAGAAGGGAAGTTGATAGTGGATAATACTGGAGAAGGTGCTGTTTTTGTTGAGGCTGAAGCAGATTGTGCTGTAGATGAAATTGGTGATTTGAGAAAACCAGATCCTGATAAGCTTGGGAAATTGGTTTATGATCTTCCAGGTGCTAAGAGTATATTGGAGATGCCTCCAATGACAGTTCAGGTGACAAAGTTCAAATGTGGAGGATTCACGTTGGGACTCAACATGCTCCACTGCATGAAAGATGGACTATCTGCCATGGAGTTTGTCAATGCATGGGCTCAAACAGCAAGAGGTTTAGACTTCAAACTCCCCCCATTTATCGATCGAACCATACTCAAATCGCGCAACCCTCCGAAAATTGAGTTCCACCACCACGAATTCGACGAAATCGAAGACCTTTCAAACGCCGAAAAAACCTATCAAGGCGAAAAAATCATCCACAAATCCTTCCTTTTCGACCCCGAAAAGCTCGACTCGCTCAAGAAAAAGGCCACGGAAGACGGAGTTTTGAAAAAATGTTCGACTTTCGAAGCACTCTCGGCTTTCGTCTGGCGATCCAGAACTTCGGCTTTAAGCATGCATCCTAATCAACAAACGAAACTTCTCTTCGCGGTCGACGGACGGTCGAGATTCGTCCCGCCGATTCCAAAGGGATACTTTGGTAACTCCATTGTGCTAACAAACTCTATGTGCAAAGCAGATGAATTACTGAAGAACCCTTTTTCATTTTCAGCTGCATTGGTTCACAATGCAATTGATATGATCAATGATAGTTACATGAGATCTGCTATTGATTATTTCGAAGTTACAAGAGCTAGACCTTCTTTAACGGCAACACTTTTGATCACAACTTGGACCAAATTGTCTTTTGACACAACAGATTTTGGTTGGGGTGAACCACTTTGTTCTGGTCCTGTGACATTGCCAGAAAAAGAAGTTGTTTTGTTCTTGTCACATGGTCAGGAAAAGAAAAGTATAAGTGTTCTTCTTGGTTTGCCTGCTTCTGCTATGGAACGTTTTGAAGACTTGGTGATGAATATGGTATGA 1314 0.4178 MAMESREISTNDLNVKRGEPIRVQPAEETENGLYFLSNLDQNIAVPMRTIYCFKSESRGNEEAGEVIKDALSKILVPYYPMAGKLIISSEGKLIVDNTGEGAVFVEAEADCAVDEIGDLRKPDPDKLGKLVYDLPGAKSILEMPPMTVQVTKFKCGGFTLGLNMLHCMKDGLSAMEFVNAWAQTARGLDFKLPPFIDRTILKSRNPPKIEFHHHEFDEIEDLSNAEKTYQGEKIIHKSFLFDPEKLDSLKKKATEDGVLKKCSTFEALSAFVWRSRTSALSMHPNQQTKLLFAVDGRSRFVPPIPKGYFGNSIVLTNSMCKADELLKNPFSFSAALVHNAIDMINDSYMRSAIDYFEVTRARPSLTATLLITTWTKLSFDTTDFGWGEPLCSGPVTLPEKEVVLFLSHGQEKKSISVLLGLPASAMERFEDLVMNMV* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1235 437 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 14 433 - -
Psa5g1235 437 Gene3D - 217 435 IPR023213 -
Psa5g1235 437 Pfam Transferase family 22 431 - -
Psa5g1235 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 433 - -
Psa5g1235 437 Gene3D - 9 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1235 Psa-Chr5 95684974 95687187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1235 23 436 Monolignol Biosynthesis Gene Families AT5G48930 35.581 1.76e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1235 K15400 - gmx:100794490 693.345