Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1211 ATGGAATGTTCCGAAGATGGTGCCTTAAGGGCGAAAAAGATGGCAGAGAAGAGGTTCTTACAGGATAACTTTGGTGTTGCAAAACTACTTGCAACGAAGGCTCGAGCCCTGAATCCCAATATTGACGGCATCAGTGAACTGATGGCAACCATTGATGTTTATATAGCTTCTGAAAAAAGAGTTGGTGCAGACGTAAATTGGTACGAGGTCCTTGGTGCACAGCCCTTGGATGATGATGAAACAATTCGGAAATGTTACAGGCAGATGGCTCTTACTCTGCATCCGGATAAAAACAAGTCGGTGGGTGCAGACGGCGCATTTAAGCTGGTTTCTCAGGCTTGGACTGTATTATCTGATAAAACTAAGAGAGCCGCCTTTGATCAGAAGTGCCGCTTATGGGAGTCCTTCAAAAGGATTACTGGTGGTATACCTCAGAATAGTTTGTTTGATACTATTAACCTTGGTGGGAAACCTTCTGAACCTGCTAGTAGGGGTGGTTTGTTTAATGCTGCTAACCGGAAGGACAGAGATCTCACGAGTGGTGCTCATGCCAATCCTACTCCAAGACCTTCTGTATCTGCTCGTTATAGTGGTTTGTTTAGTTCTGATACCGGGAAGGACATAGATCATATGAGTGCTGCTCACACCAATCCTACTCCAAACATCCCTCTTGATAAACAACCTTCATTTTGGACTGTGTGCAGTTTCTGCAGGACACATTATGAGTACTTTACTGTTTATAAAAACTGCAATATTGTTTGTGCCGGCTGCAAGAAGCCATTTTTTGCTTCTGAGACACCACCCCCGCCTTTAATCGCAAATGCTTCCCCCACTTTAAGAGCTGCTTTGTTGAAGCAGCATAAGTTCAACTCAACCGGATTGGTAAGAAACAACCATGTTTCAAGTAGGACATTGACGTCTGCCGGAAATTCCAGTGGACCGACATCAGTTTCTACTGCTTCTGGAGCTCTTGGTCATTTTAACAGGCCATCTGTGAATTTGAAGAGAAGGCATGAAGATTTGACACCTCTCATGAGTGAGGAGGCACATTTAGGGAAAACTCATGTTGAAAGAACTGTTGCAGGTTCAGATTTTCAGCCTTCTTGGAAAAAAATATGCACAGGTGAGCGTAAAGTTGATAGTGATAGACAAGGCATGGAAGCTGAAATGGCATCAAAAAAAGGAATAAGCTCTACCAATGTGTCTGGGTCTCTGAAGAATAGTTTTGATGCAGGAAAGGTTAGTGCTGCTGGAAATTCCAGACGAAATGGTATTAGGGACATGTCTCAGCAGAATATGAGGAGCATCTTGGCAGAAAAGGCTCGGAAGGTGATTTGTAAGAAACTTGATGAGTGGAAGGAGGGTCATAGAAAGCTTGATGAGTGGAAGGCGATTCGTAAAACACTTGATGAACGGTATCCGTCTTCTACATTAAAGAATACTGGTGCAGAAGTCAAAGTGAAGGAGAAAGAAAAGGCTATTATTAATGGTGTGAAGCCTGGTCCAAAAGAAATTGTTGATTCTAAGACCACCAACAACAACTCTATCTCTGCTGATTCAGAGGTGCCTCTTTCTGTCACAATGAGTGTTCCAGACCCAGATTTCCATGACTTTGATGGGGACCGAGTTGAGGACACTTTTGGTGAGAACCAAGTGTGGGCTGCATATGATGATGAAGACGGAATGCCGCGCTACTATGCCTTTATCCACAGTGTGATCTCAAAGAATCCATTCCAAATGAAGATAACCTGGCTGAGCTCTAAAACCAATGATGAATTTGCGCCGATAAAGTGGGTCGGTTCTGGCTTTCCAAAGACCACCGGGGATCTTCGACTAGGCAAGCGTGTAATCAGCAGCACTCTCAATTCTTTCTCGCACAGGGTCAAGTGGACAAAAGGTCCAAAAGGAATTTTCCGTATATATCCAAAGAAAGGGGATGTTTGGGCTCTATATCAGAACTGGTCCCCTGATTGGGATGAACTTACTAAAGATAATGTCATACATCAATACGAAATGGTGGAAGTGCTTGACGACTACAGTGAAGAGCACGGTCTGAACGTTGCTCCACTTTCCAAGGTTGCAGGTTTCAAGACAGTGTTCCGCCAGAATGCTGACTCAAGAAAAATCAGGAACATTCCAAGGGAAGAGATGTTTCGCTTTTCACACCAGGTACCTTCATACTTGCTTACCGGAGAAGAAGGTGAAAATGCTCCTAAAGGTCTCTTGGAGCTGGATCCTGCTTCTACACCTATGGAACTTCTTCAGCTGATCACTGATCCTCCAACCCAAGAAATGGAGGAAATGATGCCAGTTGAAAAATCTTCAAAAGATGACTTGAAGCACAAGGACAATTCTGGCACGGGAAAGAAGGCGGCTGGAGCACAGGCAGGGAAGGTTTGGCCTGAGAATTTGCTGGTATACAAGCGAAAGCGTTTTAAGGTAAAGAAGGATCAGTGA 2457 0.4412 MECSEDGALRAKKMAEKRFLQDNFGVAKLLATKARALNPNIDGISELMATIDVYIASEKRVGADVNWYEVLGAQPLDDDETIRKCYRQMALTLHPDKNKSVGADGAFKLVSQAWTVLSDKTKRAAFDQKCRLWESFKRITGGIPQNSLFDTINLGGKPSEPASRGGLFNAANRKDRDLTSGAHANPTPRPSVSARYSGLFSSDTGKDIDHMSAAHTNPTPNIPLDKQPSFWTVCSFCRTHYEYFTVYKNCNIVCAGCKKPFFASETPPPPLIANASPTLRAALLKQHKFNSTGLVRNNHVSSRTLTSAGNSSGPTSVSTASGALGHFNRPSVNLKRRHEDLTPLMSEEAHLGKTHVERTVAGSDFQPSWKKICTGERKVDSDRQGMEAEMASKKGISSTNVSGSLKNSFDAGKVSAAGNSRRNGIRDMSQQNMRSILAEKARKVICKKLDEWKEGHRKLDEWKAIRKTLDERYPSSTLKNTGAEVKVKEKEKAIINGVKPGPKEIVDSKTTNNNSISADSEVPLSVTMSVPDPDFHDFDGDRVEDTFGENQVWAAYDDEDGMPRYYAFIHSVISKNPFQMKITWLSSKTNDEFAPIKWVGSGFPKTTGDLRLGKRVISSTLNSFSHRVKWTKGPKGIFRIYPKKGDVWALYQNWSPDWDELTKDNVIHQYEMVEVLDDYSEEHGLNVAPLSKVAGFKTVFRQNADSRKIRNIPREEMFRFSHQVPSYLLTGEEGENAPKGLLELDPASTPMELLQLITDPPTQEMEEMMPVEKSSKDDLKHKDNSGTGKKAAGAQAGKVWPENLLVYKRKRFKVKKDQ* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1211 818 PRINTS DnaJ domain signature 68 86 IPR001623 -
Psa5g1211 818 PRINTS DnaJ domain signature 86 101 IPR001623 -
Psa5g1211 818 PRINTS DnaJ domain signature 102 122 IPR001623 -
Psa5g1211 818 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Psa5g1211 818 SUPERFAMILY Chaperone J-domain 61 126 IPR036869 -
Psa5g1211 818 Gene3D DnaJ domain 64 131 IPR036869 -
Psa5g1211 818 MobiDBLite consensus disorder prediction 304 326 - -
Psa5g1211 818 Pfam DnaJ domain 66 127 IPR001623 -
Psa5g1211 818 MobiDBLite consensus disorder prediction 769 787 - -
Psa5g1211 818 Pfam Domain of unknown function (DUF3444) 527 733 IPR024593 -
Psa5g1211 818 PANTHER BNAC03G44070D PROTEIN 1 768 - -
Psa5g1211 818 CDD DnaJ 66 119 IPR001623 -
Psa5g1211 818 SMART dnaj_3 65 122 IPR001623 -
Psa5g1211 818 MobiDBLite consensus disorder prediction 765 795 - -
Psa5g1211 818 MobiDBLite consensus disorder prediction 174 195 - -
Psa5g1211 818 PANTHER HEAT SHOCK PROTEIN-LIKE 1 768 - -
Psa5g1211 818 MobiDBLite consensus disorder prediction 304 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1211 Psa-Chr5 94605685 94609764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1211 15 271 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 27.863 8.34e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1211 - - mtr:MTR_3g099170 1084.32