Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1200 ATGGCTTTCCTAAGTGAGCAGTGGGAAGTTAATTTACCTGCTGAAGAAGTTCCACCGGAGCTTCCCGAGCCTGTGCTTGGAATTAACTTTGCCAGGGATAGCATGCCAGAAAAAGATTGGCTGTCTTTAGTTGTTGTTCATAGCGATTCATGTTACTTGCTATTGCCTACTATTTTGGAGCCAGTTCGGGTTCGACAATTTGACAGGAGACGCCTTTTCAGTATGATCAATGAACTGCCATCGATATTTGAAGTTTGTTACTGGTACAGCAAAGAAACAAGTTAA 285 0.4246 MAFLSEQWEVNLPAEEVPPELPEPVLGINFARDSMPEKDWLSLVVVHSDSCYLLLPTILEPVRVRQFDRRRLFSMINELPSIFEVCYWYSKETS* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1200 94 Pfam Alfin 4 85 IPR021998 GO:0006355|GO:0042393
Psa5g1200 94 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 5 3 89 - -
Psa5g1200 94 PANTHER CPG BINDING PROTEIN 3 89 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1200 Psa-Chr5 94271482 94271865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1200 5 85 Alfin-like Transcription Factor Family AT3G11200 65.432 8.15e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1200 - - han:110886988 110.538