Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1188 ATGCCGATCATCAGAAGCGTTACAAGAGAATATATTGGCAAGCCTATAAGATGCAAAGCTGCAATAAGCAGAAAATCAGGTGAACCTCTTGTTATAGAAGAAATTGAGTTAGAGCCACCAAAATCATGGGAAGTAAGGATCAAAATTTTGTACACATCTTTGTGCCATTCTGATGTCACTTTTTGGAAAATGAATCCTTCTTCACCTGCTGCTATGTTTCCAAGAATTCTCGGACACGAAGCCGTCGGGGTTGTGGAGAGTGTAGGAGAACATGTTGAAGAAGTGAAAGAAGGAGATTTAGTTGTGCCGGTGTTTCTACCAAACTGTGGAGAATGCAGAGATTGTGAGAGTCCAAAAAGCAACAACTGCAGCAAGTTTGGAAACGAACGAACCGTTGACATGCCAAGAGATGGAACAAGTAGGTTTAGGGACATGAATGGAGAAGTGGTGCATAATCTATTTGGTATCAGCAGTTTCTCTGAGTACACAGTGGTTGATGTAACACATGTGGTTAAAATTCGTCATGATTTTCCTCTTGATAAGGCTTGTTTGCTCAGTTGCGGTGTTTCCACAGGGGTAGGGGCGGTGTGGAAAGTGGCTGATGTAGAAAAAGGGTCCACAGTTGCTGTTTTTGGCCTTGGTGCTGTTGGTCTAGCTGTAGCTATAGCAGCAAAGCAAAGAGGAGCTTCGAAGATTATAGGCGTCGATCTAAATGAGGACAAATTTGAAATAGGAAAACGATTTGGAATAACTGATTTCGTGAATCCTTCCACTTGCAAAGACAAGTCTGTGAGCGAGGTGATTAAGGGTATGACAAATGGAGGTGCTGATTATTGCTTCGAGTGCATAGGCCTAGCATCATTAATGGAAGAGGCTTTCAATAGCAGCAGAGAAGGTTGGGGGAAGACAGTGATAATAGGTGTGGAAATGCACGGTTCGCCATTGACTTTAAGTCCTTATGACATACTGAAAGGAAAAACTATCACTGGATCACTATTTGGAGGTTTGAAACCAAAATCTGATATTCCCCTACTTGCTCAAAAGTATTTAGACAATGAACTTAACTTGGATGGTTTCATAACACAAGAGTGTTCTAATGAGTTGAGGCACGACAGTCGGGGACAGAACCTGAGAGTTCAAGCTGGAACAAAGTTGAACTCAGCTAAGGAATGA 1173 0.4211 MPIIRSVTREYIGKPIRCKAAISRKSGEPLVIEEIELEPPKSWEVRIKILYTSLCHSDVTFWKMNPSSPAAMFPRILGHEAVGVVESVGEHVEEVKEGDLVVPVFLPNCGECRDCESPKSNNCSKFGNERTVDMPRDGTSRFRDMNGEVVHNLFGISSFSEYTVVDVTHVVKIRHDFPLDKACLLSCGVSTGVGAVWKVADVEKGSTVAVFGLGAVGLAVAIAAKQRGASKIIGVDLNEDKFEIGKRFGITDFVNPSTCKDKSVSEVIKGMTNGGADYCFECIGLASLMEEAFNSSREGWGKTVIIGVEMHGSPLTLSPYDILKGKTITGSLFGGLKPKSDIPLLAQKYLDNELNLDGFITQECSNELRHDSRGQNLRVQAGTKLNSAKE* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1188 390 MobiDBLite consensus disorder prediction 371 390 - -
Psa5g1188 390 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Psa5g1188 390 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 9 366 - -
Psa5g1188 390 PANTHER ALCOHOL DEHYDROGENASE 9 366 - -
Psa5g1188 390 Pfam Alcohol dehydrogenase GroES-like domain 44 173 IPR013154 -
Psa5g1188 390 SUPERFAMILY GroES-like 13 198 IPR011032 -
Psa5g1188 390 Gene3D - 24 365 - -
Psa5g1188 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 351 IPR036291 -
Psa5g1188 390 Gene3D - 192 331 - -
Psa5g1188 390 MobiDBLite consensus disorder prediction 376 390 - -
Psa5g1188 390 Pfam Zinc-binding dehydrogenase 215 338 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1188 Psa-Chr5 92535509 92550814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1188 44 275 Monolignol Biosynthesis Gene Families AT4G37970 27.059 1.50e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1188 K00121 - mnt:21395940 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1188 5 92535509 92550814 Psa5g1188 5 92535509 92550814 ECH