Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1162 ATGCATCCTCAGGGTTGGCTTCAGAAGAACTTCTTATATCCAAACTCTGAACATAAATCCATGATTCAGAATCACTTGGCAATAACCAGCCTTCCTCGTAACCAGATATCCATATCTTCACTTCCTGATTTAATGCGTGTAATTATTGAAATGGGCATAACTGTTGTACGGTTTGGTTTATTATTCCCAGGGTTTGGTTGCGGAAGATTCTGCTGTCACATTGTGGAGAATAAGGAACAAGCCACATACTGCAACGTTGACGTCGTGCTGCGATGGAAACTACCTTGGCCAAAATATAGAACCGCACATCCAATCATTGTTCTAAGGGAAGTGGTGAGTTTCCATATGTTTCAGGAATTGAAGCCATGTAAAGGATCTTTTCTTCTTGTTCTCTCAGCAGCTAAGGGAAGTGGTTATGGTTGGTGTGATCGGTTATGGACCAGGGGCACAATTGAAGCAGGACGGCGAAAAGCCAATATAAATACTGGTGCTATTGCAGGCTTGAATGTGATGCAGATGATCAATGAACCAACTGCTGCTACCCTTGCATATGGCCAACGATTTGTACGAGCAACATGTTTGTCCTTGAAACAAAACTCATCTGCTCGTAACTTCTTTCAGACGATCCCCAGCCGTAATGTGCCGGCAATGCCAAAACTGCAAGCTGTCTTCATCACAGAAAACTCAGCAGTTGTAACAGGAACACTGAAAATTCCTTTTTCAAAAACTGTTGCATCGATCTTTGCGGCGGTTAATCCAAGGGCTTCAATATCCTCTCTCATTTCATCAATTGAATTTGTTTGCTCTCTAACAACTTTATTGACCAAAAGTCTTCTTTCTGCTTATATCAACAACTGCATGGGTGACTGCAGGTTGTGGGTGGTCACAATGTCACCAAACTCAAAGATGTGGCAAGCCCACAGATGCAGCAACGAGTCCGCTTATGTGAGCGCATCATCATAA 963 0.4289 MHPQGWLQKNFLYPNSEHKSMIQNHLAITSLPRNQISISSLPDLMRVIIEMGITVVRFGLLFPGFGCGRFCCHIVENKEQATYCNVDVVLRWKLPWPKYRTAHPIIVLREVVSFHMFQELKPCKGSFLLVLSAAKGSGYGWCDRLWTRGTIEAGRRKANINTGAIAGLNVMQMINEPTAATLAYGQRFVRATCLSLKQNSSARNFFQTIPSRNVPAMPKLQAVFITENSAVVTGTLKIPFSKTVASIFAAVNPRASISSLISSIEFVCSLTTLLTKSLLSAYINNCMGDCRLWVVTMSPNSKMWQAHRCSNESAYVSASS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1162 320 Pfam Hsp70 protein 155 185 IPR013126 GO:0005524|GO:0140662
Psa5g1162 320 SUPERFAMILY Actin-like ATPase domain 155 185 IPR043129 -
Psa5g1162 320 Gene3D - 149 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1162 Psa-Chr5 90911225 90913208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1162 155 185 Calmodulin-binding Proteins AT5G02500 64.516 2.44e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1162 K03283 K04043 gmx:102667578 50.447