Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1156 ATGCCCCATAGAGCAACTTACATTTTCCCGCGTCATTTTCCAGAGCGAGGATTCGATGAATCATCTAAAAAGCTATTGGATCACGATAAGGACAAAACCGTCCATTCAATCAAATCTGTAACGGAAAGCGACATTCAAACCAGTAACCAACTTTCGTCGTCTACTCCTCCATCAACTAAACACGACGTCGTTTTTTCCTCCGGCAAACACTCTAACTCCGACAAGCTCCGAATTAAGCAAAAGCAGATAGCGGCGTTCTGCGACTGGTTTATCGACAAAAAAAGAAATCACTCCGGTTACCAGACTCACCATCTCCGCCGCCCCTCGTCGATCTCCGATGACGATCACGACTTTCTTCTTCATCAGCCGGAGAGTGTTGTTAAAGACACTGCAATCGACCGGAATTTCGATCGGCAGGTTTCGCTTCCGAGACTTTCGAGTGATAGTAGTTATGCAGGGAGCTTGTTTTCCAGCGACATTAAGGAGGAAACACCGTTGTCTCAAGTCTCCACCATTACCACCACCATAGTGAGGAGGCAAACGGATGAAGATGAAAACAAGGAGGCGGTTGCTAAGGAGTGTAACGAAAGCTACATCTTGCAGCTTAAGTTAGCGAAGAGGCTAACTTGTTTGGCAAGTCTCGTAACGGAACCTGTTCTTACTCATGGCGCTGAAACTTGGGATGCTGAATCTGTTTCTTATCGTCTTTGGGTGAGTGGGTGCTTGTCATACACGGACAAGATAAGTGATGGTTTTTACCACATATTAGGGATGAATCCGTATATGTGGGTGATGTGCAATGATGAGGAGGAAGGTAAGAAGATACCTACTTTGTTGGCGCTTAAAGCGGTTGAACCAAGCGAGACATCTATGGAGGTGGTGCTTGTCGACAGGCACCTAGATTCTCGCTTGAAGATGCTTCATGATAAAGCTCAGGAGTTGTATTGTTCTTCAGAGAACACGTTGGTGTTCGTTGAACAACTTGGAAAACTTGTTGCCATATATATGGGGGGTATATTCCCAGTGGAGCAAGGAGATCTCCACAAAAGGTGGAGGTTGGTTAGCAAGAGGCTGAGGAATTTTCACAAGTGTGTTGTGCTTCCCATTGGCAGTCTATCTTCTGGACTTTGTAGGCATCGAGCAATTCTCTTCAAGAGATTGGCTGATTACATAGGTTTGCCTTGTCGCATAGCTCGTGGTTGCAAGTATTGTGCTGCAGATCACAGATCCACTTGCCTAGTCAAGATTAAAGATGACAAGCAGCTCTCAAGGGAATATGTTGTCGACCTAGTTGGGGAACCAGGAAATGTCCACGGCCCAGATTCCTCCATTAACGGAGCATATCTTTCTTCGATTCCTTCACCGTTTCAAATTTCTCATTTTAAGGAACTACAATCACCCTATATGGACGATGAAGCAGGTTGTGGACAGAATGATCAACAAGTTAAAGAAACGGATTTGTTGAAAGTTCACCAGGGCTCCATCTGTGCTTCAGCTGATCAACCCTGTGAAGGAACCAAACCATTTCTAGTTCCTTTTGGGTTAAAAGAGAATGATGAGGAATGTTCAGTTCTAGGTTCAATTTTGCCTACCATTCACGAGGATGTTTCTAAAGTTTTTCCTCCCACCAGGACATCATTACATGAATATCCAAGGCTTAGTGAAGAGGCAGTTGTGTTAGAAGAAAATTCCAGCAATGAAATCATTGTTACCGGATGTTCTGTGGTAAAAAGTACTTTCAAGCAATGCATACTTAGTTCCTCATGCCAATCAGAACTGAAGCAGTTAGATGATAAAATTGAAAACCAAGACTATTCGCCAGCTGGGAGTATTCCAAGATATGTGAATCTTGAACCATCACTGGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGTATTAAAGAGCGCGTTGGTGCTGGCTCATTTGGAACTGTGCACCGTGCTGAATGGCATGGATCAGATGTTGCAGTCAAGGTTTTAACAGATCAGGATTTTCATGATGATCACTTGAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAACGTGGTGCTCTTCATGGGTGCAGTTACAACACGCCCCTATCTATCAATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCGTCTGGTGAAGTTCTGGATAGTAGGAGAAGATTACGAATGGCTTTGGATGTGGCTAAAGGAATCAATTATCTCCATTGTCTTAAACCTCCAATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAAAAATTGGACTGTGAAGGTCTGTGATTTTGGATTGTCCAGATTTAAAGCAAACACTTTCATACCCTCAAAATCTGTTGCCGGAACACCTGAGTGGATGGCCCCAGAATTTCTTCGCGGAGAACCTTCAGATGAGAAATCTGACGTATACAGTTTTGGAGTTATCCTGTGGGAGCTTGTAACCATGCAACAACCATGGAGTGGACTTAGCCCTCCCCAGGTGGTTGGAGCTGTTGCTTTTCAGAATAGGAAGCTTGCTATCCCTCCAAACATCTCCCCAGTATTTGCCTCTCTCATGGAATCTTGTTGGGCTGATGACCCTGCTCAGCGTCCATCTTTCGGTGGCATAATTAATACACTAAAGAAGCTGCTGAAATCTCCAACAGAGATGATAAAAATGGGCGATATGCATAACCCTTGA 2721 0.4429 MPHRATYIFPRHFPERGFDESSKKLLDHDKDKTVHSIKSVTESDIQTSNQLSSSTPPSTKHDVVFSSGKHSNSDKLRIKQKQIAAFCDWFIDKKRNHSGYQTHHLRRPSSISDDDHDFLLHQPESVVKDTAIDRNFDRQVSLPRLSSDSSYAGSLFSSDIKEETPLSQVSTITTTIVRRQTDEDENKEAVAKECNESYILQLKLAKRLTCLASLVTEPVLTHGAETWDAESVSYRLWVSGCLSYTDKISDGFYHILGMNPYMWVMCNDEEEGKKIPTLLALKAVEPSETSMEVVLVDRHLDSRLKMLHDKAQELYCSSENTLVFVEQLGKLVAIYMGGIFPVEQGDLHKRWRLVSKRLRNFHKCVVLPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSTCLVKIKDDKQLSREYVVDLVGEPGNVHGPDSSINGAYLSSIPSPFQISHFKELQSPYMDDEAGCGQNDQQVKETDLLKVHQGSICASADQPCEGTKPFLVPFGLKENDEECSVLGSILPTIHEDVSKVFPPTRTSLHEYPRLSEEAVVLEENSSNEIIVTGCSVVKSTFKQCILSSSCQSELKQLDDKIENQDYSPAGSIPRYVNLEPSLAMDWLEISWDDLRIKERVGAGSFGTVHRAEWHGSDVAVKVLTDQDFHDDHLKEFLREVAIMKRVRHPNVVLFMGAVTTRPYLSIVTEYLPRGSLYRLIHRPASGEVLDSRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSDEKSDVYSFGVILWELVTMQQPWSGLSPPQVVGAVAFQNRKLAIPPNISPVFASLMESCWADDPAQRPSFGGIINTLKKLLKSPTEMIKMGDMHNP* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1156 906 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 167 901 - -
Psa5g1156 906 SMART serkin_6 633 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1156 906 SUPERFAMILY Protein kinase-like (PK-like) 609 886 IPR011009 -
Psa5g1156 906 Pfam Protein tyrosine and serine/threonine kinase 633 887 IPR001245 GO:0004672|GO:0006468
Psa5g1156 906 MobiDBLite consensus disorder prediction 39 71 - -
Psa5g1156 906 ProSiteProfiles Protein kinase domain profile. 633 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1156 906 PRINTS Tyrosine kinase catalytic domain signature 707 720 IPR001245 GO:0004672|GO:0006468
Psa5g1156 906 PRINTS Tyrosine kinase catalytic domain signature 748 766 IPR001245 GO:0004672|GO:0006468
Psa5g1156 906 PRINTS Tyrosine kinase catalytic domain signature 814 836 IPR001245 GO:0004672|GO:0006468
Psa5g1156 906 PRINTS Tyrosine kinase catalytic domain signature 858 880 IPR001245 GO:0004672|GO:0006468
Psa5g1156 906 Gene3D Phosphorylase Kinase; domain 1 626 710 - -
Psa5g1156 906 Pfam Ethylene-responsive protein kinase Le-CTR1 229 437 - -
Psa5g1156 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Psa5g1156 906 ProSitePatterns Protein kinases ATP-binding region signature. 639 660 IPR017441 GO:0005524
Psa5g1156 906 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 167 901 - -
Psa5g1156 906 CDD STKc_MAP3K-like 639 887 - -
Psa5g1156 906 Gene3D Transferase(Phosphotransferase) domain 1 712 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1156 Psa-Chr5 90338941 90346066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1156 1 901 MAP Kinase Kinase Kinase AT4G24480 55.260 0.0 1015
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Psa5g1156 PK_Tyr_Ser-Thr 3.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1156 - - gmx:100808435 1375.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1156 5 90338941 90346066 Psa5g1156 5 90338941 90346066 ECH
Psa2g1509 2 115337206 115344168 Psa5g1156 5 90338941 90346066 PCT
Psa2g0356 2 13709488 13715826 Psa5g1156 5 90338941 90346066 PCT