Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1147 ATGCCAGAAAAAAAGTCTAAGCAGCTTACTTTCTCCCAAATTGACGCCGTTACTGTCTCACAACGGTATGATCCAACTACTGTGTTTACTGTGCTTCAGGAATTATCACATTATCCTGCCTGGAAGAAATTTGATTGGGATGAATTGGTGAAGAAAACCTCATCTGGTATTTCTAATGCCAGAGAATATCAGATGCTATGGCGTCATTTGGCGTATCGTTATTCCTTGCATGATGATTTTGAAGCGGATGATCCTATGGATGATGACAGTGACCTCGATTATGAGCTGGAGCCATTACCTTCTATAAGTGCGGAATCTACACCAGAGTGCTCAGCTTGTGTGAAGGTGATGATGGCTTCCCGTACGCTAAGTGAATCTACCCCTAGTAGCTCAACAATTGAGGCTCCATTGACCGTAAATTTTCCAGTTTGTCATTCATTTAGAACTTCAAGGGAAATTTCAGATCCCTCTAATTTGATGGAACAGACAAGCATTACGTTTCCAGTTACTGTTCAGAGACAGACACTTCCAACTGTATCATCTTCAGATGCTTTAGAAACCAAAGGAACAGTTGGTGGTTCCATGGCTTCCAAAAGGAAAAGAAAAGCATGGTCAGAGGAAGAGGACAATCAGTTACGGGCTGCTGTTCAGAAATGGGGTGAAGGGAATTGGGCAAACATGGCAAAAGGAGACAACTTTCCTATTAAGAGAAGTGCAACACAATTGTCACAGAGGTGGACCACTTTACGAAAGAAAGACGGCAGTGGAACTTCAGGAACCGTCAATTCAGGAGCCACTGTGACCACCACCAACACACAGTATACTGCTGAACAGTTGGCAACTCGTCACTCCTTAAATTTAGCCCTTGACATGCCATTCAAAAAGTTAACTGCTCCTGGAATGACTGATCCTGGTAGGACATCCATGTCAATTAATAATCAAGTGCAGTCTCGTAATACGACGCAAGTCTCCACAGTTCGTAGTTCTGTACCGCTTCAGCGTCCATCTCAACAAGCTTGTGGTTCCCCTGTGAAACCCACAGCCACCTCTGACAATCCAGTCTCAAGATGTATTGCAAGTTCAGCTCGCGAGATAAAACCTGCCAATATTCACTCTGGAGCACAAACTGTTTCACGATCAAATGCAGTACCAAATGCTGCAAGTTCAGCTCGCGAGATAAAACCTGCCAATATTCACTCTGGAGCACAAACTGTTTTGCGATCAAATGCAGTACCAAATGCTGTAATTGTAGCTCGTGAGTTAAAACCTGCCATTATTCACTCTGGAGCACAAACTGTTTCACGATCAAATGCAGTACCAAATGCTGCAATTTCAGCTCGCGAGTTAAAACCTGCCATTACTCACTCTGGAGCACAAACTGTTTCACGATCAAATGGAATACCAAATGCTGCAATTTCAGCTCGCGAGATAAGACCTGCCAATATTCACTCTGGAGCACAAACTGTTTCACGATCAAATGCAGTACCAAATGCTGCAATTTCGGCCCGCGAGTCAAAACCCGCCATTGTTCACTCTGGAGCACAAACTGTTTCTCGATCAAATGCAGTACCAAATGCTGCAATTTCAGCCCGTGAGTTAAAACCTGCCATTGTTCACTCTGGAGCACAAACAGTTTCACGATCAAATGCAGTCCCAAATGCTGCAATTTCGGCCCGCGAGTTAAAACCTGCCATTATTCACTCTGGAGCACAAACTGTTTCTCGATCAAATGCAGTACCAAATGTATCGCCACAATTTAAGGTTTCTCAAACGAAAAATGTGGCACATTTGGTTCCTGCTGGTAGTTCTATGGCAAAGACATCCATTTCTGCTGGTTTGCATTCTAACCAAAAGGTTCATTCAAATGTTACCTCTGTGAAAGAACAGGAAAAAAGAGTTTCTGATTCTGGCTCCACACCAAAAGAGAAGGTGACGGAGAAAAATGTGGTACACGCTGTGCCTGCTGGTAGTTCTTTGACAAAGACATCCATTTCTGCTGGTTTGCCTTCTGACCAAAAGGATAAACATGTCACCTCTATGAAAGATCATGAAAAAATAGTTTCTGATCCTGGCTCCACGCCAAAAGAGAAGGTGAAAGAAGCCGGAGCTTCTGCATTAATTACTCAGAGCCAGATAGATAACAAACAGAATAAAGTGGGGCTAGATTTAGATAAAGCCAAAAGCACGCCTAGCATGAAAGTTTTGGAACACAAAGCAGTGCCACAAAATCCAGGAAGGTGTGAAGAGCAAGGAAGTGTTAAGAATTCAATATTTATCCCCAAGCCCACTGGGAATGGAAATAGCAATTTGAATGAGGAAAGTCAAGTTCAAAATCAAGACAAGAAGGCAAGTTCTGTTAATGGAAGCTCTAACCAACCATCAAAACAGGAATGA 2394 0.4302 MPEKKSKQLTFSQIDAVTVSQRYDPTTVFTVLQELSHYPAWKKFDWDELVKKTSSGISNAREYQMLWRHLAYRYSLHDDFEADDPMDDDSDLDYELEPLPSISAESTPECSACVKVMMASRTLSESTPSSSTIEAPLTVNFPVCHSFRTSREISDPSNLMEQTSITFPVTVQRQTLPTVSSSDALETKGTVGGSMASKRKRKAWSEEEDNQLRAAVQKWGEGNWANMAKGDNFPIKRSATQLSQRWTTLRKKDGSGTSGTVNSGATVTTTNTQYTAEQLATRHSLNLALDMPFKKLTAPGMTDPGRTSMSINNQVQSRNTTQVSTVRSSVPLQRPSQQACGSPVKPTATSDNPVSRCIASSAREIKPANIHSGAQTVSRSNAVPNAASSAREIKPANIHSGAQTVLRSNAVPNAVIVARELKPAIIHSGAQTVSRSNAVPNAAISARELKPAITHSGAQTVSRSNGIPNAAISAREIRPANIHSGAQTVSRSNAVPNAAISARESKPAIVHSGAQTVSRSNAVPNAAISARELKPAIVHSGAQTVSRSNAVPNAAISARELKPAIIHSGAQTVSRSNAVPNVSPQFKVSQTKNVAHLVPAGSSMAKTSISAGLHSNQKVHSNVTSVKEQEKRVSDSGSTPKEKVTEKNVVHAVPAGSSLTKTSISAGLPSDQKDKHVTSMKDHEKIVSDPGSTPKEKVKEAGASALITQSQIDNKQNKVGLDLDKAKSTPSMKVLEHKAVPQNPGRCEEQGSVKNSIFIPKPTGNGNSNLNEESQVQNQDKKASSVNGSSNQPSKQE* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1147 797 MobiDBLite consensus disorder prediction 620 644 - -
Psa5g1147 797 SUPERFAMILY Homeodomain-like 199 252 IPR009057 -
Psa5g1147 797 MobiDBLite consensus disorder prediction 187 209 - -
Psa5g1147 797 MobiDBLite consensus disorder prediction 314 353 - -
Psa5g1147 797 MobiDBLite consensus disorder prediction 756 797 - -
Psa5g1147 797 ProSiteProfiles Myb-like domain profile. 196 250 IPR001005 -
Psa5g1147 797 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 486 795 - -
Psa5g1147 797 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 384 - -
Psa5g1147 797 MobiDBLite consensus disorder prediction 660 695 - -
Psa5g1147 797 MobiDBLite consensus disorder prediction 624 644 - -
Psa5g1147 797 CDD SANT_TRF 202 251 - -
Psa5g1147 797 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 254 IPR017930 -
Psa5g1147 797 Pfam Myb-like DNA-binding domain 201 249 IPR001005 -
Psa5g1147 797 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 384 - -
Psa5g1147 797 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 486 795 - -
Psa5g1147 797 Gene3D - 194 255 - -
Psa5g1147 797 MobiDBLite consensus disorder prediction 728 797 - -
Psa5g1147 797 SMART sant 200 252 IPR001005 -
Psa5g1147 797 MobiDBLite consensus disorder prediction 674 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1147 Psa-Chr5 89356163 89368982 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa5g1147 Myb_DNA-binding 7.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1147 - - mtr:MTR_3g100180 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1147 5 89356163 89368982 Psa5g1147 5 89356163 89368982 ECH
Psa2g1513 2 115479644 115480989 Psa5g1147 5 89356163 89368982 PCT