Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1128 ATGAACACAAACAAAGCAGAAGCTGAACGGTTACTGGAAATAGGCGAAGAGCTTTTACAGAAACGAGATCTGAAAGGTTCACGAGAATTAGCAATTCTCGTTCAAGAAACCGAGCCTCTTCTAGAAGGTTCCGACCAGATCCTAGCAATCGTCGACGTTCTGGAGGCAGCTGAAAAGCCTCTGAACCTCAACAACCACCACCTCGATTGGTACGCGATACTTCAAATCGATCGAAATTCGCGAGAGTCGCACGATCCGAATCTCATAAGGAAACAGTATCGTACTCTGGCTCTTCTTCTTCATCCTGATAAGAATCCGTTTTCATTCGCCGAACTTGCTTTCAAGCTCGTTTCTGATGCTTGGGCCGTTTTGTCTGACCCGGCCCAAAAGGCCCAATATGATAGGGGGTTTGAAGTGGAGGAGAATGGGTTGGTTAGTTTTTGGACTGCTTGTCCTTATTGTTACTGTTTGTACGAGTATGCTAGGGTTTATGAGGGGTGTTGTTTGATGTGTCAGAATTGTGATAAGTCCTTTTCTGCTGTTTCGATTCCGACTCTTCCCCCGCTTGTTCCGGGGGAAGAAGCTTATTATGTTTCTTGGGGGATGTTTCCGATGGGGTTTGTGTTTGAGAGTTTGGAAAATGGCGGCGGCGGTGGTGGTGATGGTTCCGTTGATAAGAGAAAGTGA 687 0.4643 MNTNKAEAERLLEIGEELLQKRDLKGSRELAILVQETEPLLEGSDQILAIVDVLEAAEKPLNLNNHHLDWYAILQIDRNSRESHDPNLIRKQYRTLALLLHPDKNPFSFAELAFKLVSDAWAVLSDPAQKAQYDRGFEVEENGLVSFWTACPYCYCLYEYARVYEGCCLMCQNCDKSFSAVSIPTLPPLVPGEEAYYVSWGMFPMGFVFESLENGGGGGGDGSVDKRK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1128 228 SUPERFAMILY Chaperone J-domain 65 137 IPR036869 -
Psa5g1128 228 CDD DnaJ 69 126 IPR001623 -
Psa5g1128 228 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 210 - -
Psa5g1128 228 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Psa5g1128 228 Gene3D DnaJ domain 55 146 IPR036869 -
Psa5g1128 228 PRINTS DnaJ domain signature 71 89 IPR001623 -
Psa5g1128 228 PRINTS DnaJ domain signature 93 108 IPR001623 -
Psa5g1128 228 PRINTS DnaJ domain signature 109 129 IPR001623 -
Psa5g1128 228 ProSiteProfiles dnaJ domain profile. 69 137 IPR001623 -
Psa5g1128 228 SMART dnaj_3 68 129 IPR001623 -
Psa5g1128 228 Pfam DnaJ domain 69 134 IPR001623 -
Psa5g1128 228 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1128 Psa-Chr5 87711328 87712783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1128 2 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 52.500 4.16e-84 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1128 - - mtr:MTR_3g100330 380.948