Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1127 ATGTTGCATGACCTTATTCTTCAGTGCAATCCAACAATGGCATATTCAGGATCAATTCGATTGTCTCATGACGTTAAGCAATATATTAGTATTGGAAGCTGTAGTTTTTGTCATAAACCGAATCCTGGTAATCGATTATGTTTTGTTGCCTTCGACCGTTTGTGCCATGGGTTGAGAATGGAGTCTTCACCGCGCATCTCTTCCCGATTATATAGTCAAATTAAGCCTATACCATCTAGTTGTAATGCTTTGTTGTGCCGGTCTGCTCTTGTACCGGCTGGAGGGTGTGAGGCTCCACTGATAAAAGTGGCTACTGTTTCTTTGTCGAGGTCATTTAATGCTATATCAGGAAGACCAACTGTGCTTCAATTGATCCCTGCCCTTGGTATCATTGGCTTTGCTGTCTTTGGTCTTGAACCTCTCCTGCGCTTTTGCAGATCTCTGTTTCTCCAAGAATGGACTGATAGAAGTTGGAAGAAAAGTAATTCATGTTATATAATGACATCTTATTTCCAACCTTTGCTGCTGTGGACTGCCGTACTGCTCATCTGCAGGAGTTTAGATCCACTAGTCCAGCAATCAAAAACCAGTTCAGTTATAAAACAACGGCTGCCGAGTTTTATCAGATCTTTTTCAACTGTGTTTACATTTGCTTACTGTTCTTCAAGCTTTGTTCGACAAGCACAAAAATTATGTATGGAGACAAATGGCTCCAGTGTAGAACGAAATATGAGCATTGATCTTATCGGGAAAGCTGTATATACCGCAATATGGGTTGCTGCCGTGTCATTGTTCATGGAGTTGCTGGGTCTCTCCACTCAGAAGTGGTTGACTGCTGGTGGTATGGGTACAGTGTTGCTTTCGCTTGCGGGTCGTGAGATATTCACGAACTTCCTTTCAAGTTTGATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTAAAACAAAGATAAAAGGATACGAGGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAGTAGTTAGAGGTGCTGATTGTGAAGCAGTTCACATTCCTAATCACAAGTTGAGTGTAAATGTTGTAAGGAATCTTAGTAAGAAAACTCATTGGCGCATCAAAACTCACCTTGCTATCAGTCACTTGGATCTTAACAATATTAGCAGCATCATAGCTGATATGCGCAAGGTTTTGGCCAAATATCCTCTAGTAGAGCAAAGAAAATTGCACAGAAGGGTTTTCCTGGAGGATGTCAATCCAGAAAATCAAGCTCTCATGATACTAGTATCTTGCTTTGTTAAAACATCACATTCTGAAGAGTACCTCCGTGTTAAGGAGGCCATTCTGTTGGATCTTCTAAGAGTCGTCAGTCATCATGGAGCTCGGCTAGCCACACCCATCCGCACAATTCAGAAGATGTACAGTGATTCTGATTTAGAAATTGATCCATTTGACAGTGCCATTTTCACTCGTTCTAGAGCAAAGGGAAACCACTCTGTCCCATTCATAGACGATGGTGAAAAAATTGCAGCGACATGGACTCCCTCTTCCAGTGTAAAGTCCCAGGATAAGTTTAAGTCATCATCTCAAGCCAAGCCGCAGAATGTCGGTTCTGATAATTTTGTCCAGAAGGCCTCTAAATCGAGAACAGCACCCAAAACTTTGTCATCATCCAAGGGAACTTCGCCTTCAAAGAAAGATGAAGAAAAATGA 1707 0.42 MLHDLILQCNPTMAYSGSIRLSHDVKQYISIGSCSFCHKPNPGNRLCFVAFDRLCHGLRMESSPRISSRLYSQIKPIPSSCNALLCRSALVPAGGCEAPLIKVATVSLSRSFNAISGRPTVLQLIPALGIIGFAVFGLEPLLRFCRSLFLQEWTDRSWKKSNSCYIMTSYFQPLLLWTAVLLICRSLDPLVQQSKTSSVIKQRLPSFIRSFSTVFTFAYCSSSFVRQAQKLCMETNGSSVERNMSIDLIGKAVYTAIWVAAVSLFMELLGLSTQKWLTAGGMGTVLLSLAGREIFTNFLSSLMIHATRPFVVNERIKTKIKGYEVSGRVEHVGWWSPTVVRGADCEAVHIPNHKLSVNVVRNLSKKTHWRIKTHLAISHLDLNNISSIIADMRKVLAKYPLVEQRKLHRRVFLEDVNPENQALMILVSCFVKTSHSEEYLRVKEAILLDLLRVVSHHGARLATPIRTIQKMYSDSDLEIDPFDSAIFTRSRAKGNHSVPFIDDGEKIAATWTPSSSVKSQDKFKSSSQAKPQNVGSDNFVQKASKSRTAPKTLSSSKGTSPSKKDEEK* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1127 568 Gene3D - 309 362 IPR023408 -
Psa5g1127 568 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 13 568 IPR045042 -
Psa5g1127 568 MobiDBLite consensus disorder prediction 513 559 - -
Psa5g1127 568 Gene3D - 166 308 - -
Psa5g1127 568 SUPERFAMILY Sm-like ribonucleoproteins 294 364 IPR010920 -
Psa5g1127 568 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 13 568 - -
Psa5g1127 568 MobiDBLite consensus disorder prediction 513 568 - -
Psa5g1127 568 Pfam Mechanosensitive ion channel 251 460 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1127 Psa-Chr5 87705115 87710976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1127 13 566 Mechanosensitive Ion Channel Family AT1G58200 50.519 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1127 K22047 - gmx:100797302 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1127 5 87705115 87710976 Psa5g1127 5 87705115 87710976 ECH