LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g1095	ATGGACTTCATCCCATTCAACAACATATTCATGGGTTGGTGTCAAATGCAGCTCTTCCTACCGTGTCATCTCTCTCAACCTATCCGATTATCAGATTTATGGTCAACTAGGACCCGAACTAGCTCATTGCACGAACTCAGCCACATAAACCTTGAGAATAACAAATTTAATGTTCAAATACCCTACTCTTTCACTAACCTTCACAACCTATACCATCTCAGCCTTTCTACTAATCTCTTGGTAGGTCCATTTCCTCATTTCTGGTCTCAAATCCCTAATCTCCACCTTCTTGATCTCTCTCATAACCATCTTAATGGTTCCATCCCCTCTAGTATTGGCAATATGACTCAACTTCGCAACTTGTATCTCCAAAACAACCATTTCTCTGCTGCAATTCCATCTTCCATTGGGAACTGCACTCAATTACAAGAATTGTTTTTGAATCATAATCAGTTGGAGGGTGCCATTCCTCACACGATAAACCGTCTCAATCTTCTTATTCATTTTGACAATCATCTTATTCATTTTGACGTTGCCTTCAATAGCCTAACAGGTCCTTTGCCATTTCAGCTGTCAAACTGTACCAAAATGGACAAGTTTGATGTAGGATTTAATTTCCTGAATGGATCATTGCCGTCAAGTTTGCAGAGGTGGACAAAGCTAAACACGCTTTTTTTGAGTGAGAATCGTTTCAGTGGCGGCATTCCAGCTTTCTTGTCGGCATTTAAAGGACTTTCTGAACTACAGCTTGGCGGCAATATGTTTGGAGGGAGAATTCCTCGATCAGTCAGGGCATTACAGAATTTGAGGTATGGGTTGAATCTAAGTTCTAATGGACTGATTGGAGACATACCTGTGGAAATTGGAAAGCTGAAAGCTCTGCAAATGCTGGATCTATCTCAGAACAATTTGACAGGAAGCATACAAGTTCTTGATGAACTCCCTTCATTATTCGAAATCAATATTTCAAACAATTATTTTTGGGGTCCCATACCGAAGATGCTACTGAAGCTGCTTAATTATCGTTGGTCGTCATTTTTGGGGAATCCTGGCCTATGTATCAGTTGTTCACCATCCAGTGGCTTGGTTTGCAACGGAACCAGCTATGTAAAACCATGTGACAATAACAAAGCTGTGGGCCTCAGTAAAATTGCAATTGTGATGATCGCTCTAGGATCCTCAATATTTGCTGTTTTGCTGTTGATGGGATTAGTTTATATCTTTGCTTATGCCAGAATATCTAAGCAGGAAGTCCATATCACTGATGATGATGATAATGGAGGTCCTTCGTCCCTTTTAAAAAAAATCATGGAGGCTACATCGAACCTAAGTGATCGGTATATTATTGGCAGAGGAGCCCATGGAGTTGTCTATAAAGCCCTTGTAAGTCAAGACATAGCTTATGCTGTAAAGAAGCTAGCATTTGCTGCCAGCAATGGTAATAAGTTGAGCATGGTCACAGAAATTCAAACCCTTGGACAAGTTAGGCATCGAAATCTTGTTAAATTGGAAAACTTTTGGTTTAAACAAGATTATGGTCTAATTCTGTATAGCTACATGTCAAACGGAAGCCTTTATGATATATTGCATGAAAAGAAACCAGCACCGTCTTTTGAGTGGAATGTCCGGTATAAGATAGCTATTGGAATTGCTCATGGGCTGGCTTACCTCCATTATGACTGTGATCCTCCCATAGTGCACCGAGATATCAAACCAAGCAACATACTTCTAGACTCTGATATGGAGCCTCACATTGCAGACTTCGGTATTGCCAAACTTCTGGACCTGACTTCATCAAATCCTTCCTCATCTGTGCCAGGCACAATTGGTTATATTGCACCAGAGAATGCTTATACAACAGTATGTAGCAGGGAGTGTGATGTGTACAGTTATGGAGTTGTTTTGCTTGAGCTAATAACCAGAAAGAAGGTAGTAGATCCTTCATTTATGGAGGAGGGTATTGATTTAGTTGGTTGGGTTAGATTGTTGTGGAGTGAAACAGAAGAAATTAATCAAATTGTTGATTCAAGCCTTGCAAATGAGTGTCAAGATACCAACATAATGGAAAATGTTACCCAAGTGCTTATGGTGGCTTTGAGATGTGCTGAGAAGGATCCACACAAGAGGCCCAAAATGACAGATGTTACTAAGCAATTATCAGATTCTAATCCATAG	2175	0.4018	MDFIPFNNIFMGWCQMQLFLPCHLSQPIRLSDLWSTRTRTSSLHELSHINLENNKFNVQIPYSFTNLHNLYHLSLSTNLLVGPFPHFWSQIPNLHLLDLSHNHLNGSIPSSIGNMTQLRNLYLQNNHFSAAIPSSIGNCTQLQELFLNHNQLEGAIPHTINRLNLLIHFDNHLIHFDVAFNSLTGPLPFQLSNCTKMDKFDVGFNFLNGSLPSSLQRWTKLNTLFLSENRFSGGIPAFLSAFKGLSELQLGGNMFGGRIPRSVRALQNLRYGLNLSSNGLIGDIPVEIGKLKALQMLDLSQNNLTGSIQVLDELPSLFEINISNNYFWGPIPKMLLKLLNYRWSSFLGNPGLCISCSPSSGLVCNGTSYVKPCDNNKAVGLSKIAIVMIALGSSIFAVLLLMGLVYIFAYARISKQEVHITDDDDNGGPSSLLKKIMEATSNLSDRYIIGRGAHGVVYKALVSQDIAYAVKKLAFAASNGNKLSMVTEIQTLGQVRHRNLVKLENFWFKQDYGLILYSYMSNGSLYDILHEKKPAPSFEWNVRYKIAIGIAHGLAYLHYDCDPPIVHRDIKPSNILLDSDMEPHIADFGIAKLLDLTSSNPSSSVPGTIGYIAPENAYTTVCSRECDVYSYGVVLLELITRKKVVDPSFMEEGIDLVGWVRLLWSETEEINQIVDSSLANECQDTNIMENVTQVLMVALRCAEKDPHKRPKMTDVTKQLSDSNP*	725

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g1095	724	PANTHER	OS08G0446200 PROTEIN	42	165	-	-
	Psa5g1095	724	PANTHER	OS08G0446200 PROTEIN	130	722	-	-
	Psa5g1095	724	ProSitePatterns	Protein kinases ATP-binding region signature.	449	472	IPR017441	GO:0005524
	Psa5g1095	724	Gene3D	Transferase(Phosphotransferase) domain 1	520	724	-	-
	Psa5g1095	724	Pfam	Leucine rich repeat	45	104	IPR001611	GO:0005515
	Psa5g1095	724	Pfam	Leucine rich repeat	273	326	IPR001611	GO:0005515
	Psa5g1095	724	SUPERFAMILY	Protein kinase-like (PK-like)	432	719	IPR011009	-
	Psa5g1095	724	PANTHER	RECEPTOR KINASE-LIKE PROTEIN XA21	130	722	-	-
	Psa5g1095	724	PANTHER	RECEPTOR KINASE-LIKE PROTEIN XA21	42	165	-	-
	Psa5g1095	724	ProSiteProfiles	Protein kinase domain profile.	443	724	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa5g1095	724	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	565	577	IPR008271	GO:0004672\|GO:0006468
	Psa5g1095	724	Gene3D	Ribonuclease Inhibitor	19	361	IPR032675	-
	Psa5g1095	724	SUPERFAMILY	L domain-like	34	358	-	-
	Psa5g1095	724	Pfam	Protein kinase domain	448	717	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa5g1095	724	Gene3D	Phosphorylase Kinase; domain 1	424	519	-	-
	Psa5g1095	724	SMART	serkin_6	443	720	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa5g1095	724	PRINTS	Leucine-rich repeat signature	94	107	-	-
	Psa5g1095	724	PRINTS	Leucine-rich repeat signature	291	304	-	-
	Psa5g1095	724	ProSiteProfiles	Leucine-rich repeat profile.	293	315	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g1095	Psa-Chr5	85300677	85303229	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g1095	6	721	Receptor kinase-like Gene Family	AT1G73080	44.000	0.0	566

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Psa5g1095		Pkinase	9.9e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g1095	-		-	gmx:100778035	835.869