Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1094 ATGACGACTCCTTCTTCTTCTACTTCTAACAAACCTTCTTCTCCGAATCGAGGTAAGGGACAGTCGATTCAGCAACGGAGGTTTACTAGACAGAAAAGGCTGTTTTACCCTACCGATCATCAAGACGGTGAAGCGTTTCTTTCCACGGAAAGTGTTTCGTTTTCTTTACCGGCTTCGCCTCTGAGGTCTAGCTCCGATCATTGGTCTTCTTCGGCTGTTCCGTTACCGCTTCCGTTGCCGGAGTCGCCGTTGACTCGACGACCAGATCATCATGCTGCGGTACCTTGTGCCAGAAAGACGATGGATCATGATGCTGTGAGAAGTTCAAGGTCTTCCAGCAATTTAGGTAGACCTGTTTTTGCCACAGTGACTGGAAATGCGAAGAATGATTTAAGAGTGAATATTCCTCCTGTTAGAAGCTTGGTGACAAGCAACAGTTCTTGTAAAGATACTAGAAAACACTCTCATGACAATGATTGTGAAGGTGTTACCAATGGGAAGTTGCAATTTGCTGCTAGGAGTGCCCCGACGAGTATATTCTCCAGTCCTGTTACTAGTCCACGCAGATTAAGCAATGTAGATTTATTTGATCCTTCCATCAATTTTCCTCAAGATTTTAATGACATTTTGAGGATGCCTGCTAAAACGTCTCATAGTCCAGACTTGTCTCCTCGTCGTAGCTTGGGGAACCACAGTCCTAAACACCACTACACTATTCAAGGGGGATCTCATTCGCACCAATCTAAATTTTGCACTAGGGTGTGGCCGGAAAATAACCATGCCGATGCACATCCGTTGCCCCTTCCACCGAGAGCTTCACCGCAGCCACAGCAATCACCTTCACAACATCAACCAAGTTCCACGATGCATCACTCAACAGAAAATTTCCATTCAATGAAGGGTCAATGGCAGAAAGGAAAATTAATTGGACGAGGATCATTTGGAAGTGTTTATCATGCAACAAACCTAGAGACCGGAGCCTCATGTGCCTTGAAAGAGGTAGATCTGTTTCCTGATGATCCTAAATCTGCTGACTGTATAAAGCAACTCGACCAGGAAATCAGGATTCTTGGTCAACTAAACCACCCCAACATTGTACAATATTATGGCAGTGAAGAAGTTGGTGATCGATTGTGCATATATATGGAATTTGTCCATCCTGGATCACTTCAGAAGTTTATGCAAGAACATTCTGGGGCTCTGACAGAATCTGTGGTTCGAAATTTTACGAGGCATATTCTCTCTGGATTGGAGTACCTACACAGTAACAACACTATCCACAGGGACATCAAAGGTGCAAACTTGCTAGTTGATGCATCAGGCATTGTCAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACGGAGAAATCATATGAACTTTCCCTGAAAGGAAGTCCCTACTGGATGGCTCCAGAGCTCATGATGGCTACCATGAAGAAAGAAAGCAATCCCAACGTCGCCATGGCTGTTGATATATGGAGCTTAGGATGCACCATCATCGAAATGCTGACAAGTAAACCTCCTTGGAGCGAGTTTCCAGGGCACCAAGCCATGTTCAAGGTACTGCACAGATCCCCGGACATACCCGAGACTTTATCTCCAGAAGGCCAGGATTTCCTTGAGCAGTGTTTCCGAAGGAATCCTGCAGAACGTCCATCCGCAGCGATGCTTCTAACACATGCCTTTGTACAAAATTTGCATGATCACGATGTTATAGTTCATTCACTAGGCTGTTCTAAAGAACACACGACAGTTCATTCACAAGGATTTCAAAAAGAAGACGACTCTGGACCCAAAGATGAATCCCGTAAACATAGTCCAGGACACAGTTCAAAAAATAGCCGAGGTGTAGTGCCAGCCTCCTTTCGTGCACGGTTTTTATGCAAAATTCAAAATTTAATTGGTGACACTTCCAAAAAAGCTGATACCGAGGTACCTAATCACATTAGATCTTCTCCTGTATCGCCTTGTTCGCAGACAGAAAGTAACAGTCCTCAATCTCCCTTTAAATCTAATACCCGCAATTGCATGACTGTTACCAAATCCTCCAACATACCCTACACCGTTATGAGATTCGTGAAGCACCTGTGA 2094 0.4446 MTTPSSSTSNKPSSPNRGKGQSIQQRRFTRQKRLFYPTDHQDGEAFLSTESVSFSLPASPLRSSSDHWSSSAVPLPLPLPESPLTRRPDHHAAVPCARKTMDHDAVRSSRSSSNLGRPVFATVTGNAKNDLRVNIPPVRSLVTSNSSCKDTRKHSHDNDCEGVTNGKLQFAARSAPTSIFSSPVTSPRRLSNVDLFDPSINFPQDFNDILRMPAKTSHSPDLSPRRSLGNHSPKHHYTIQGGSHSHQSKFCTRVWPENNHADAHPLPLPPRASPQPQQSPSQHQPSSTMHHSTENFHSMKGQWQKGKLIGRGSFGSVYHATNLETGASCALKEVDLFPDDPKSADCIKQLDQEIRILGQLNHPNIVQYYGSEEVGDRLCIYMEFVHPGSLQKFMQEHSGALTESVVRNFTRHILSGLEYLHSNNTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMMATMKKESNPNVAMAVDIWSLGCTIIEMLTSKPPWSEFPGHQAMFKVLHRSPDIPETLSPEGQDFLEQCFRRNPAERPSAAMLLTHAFVQNLHDHDVIVHSLGCSKEHTTVHSQGFQKEDDSGPKDESRKHSPGHSSKNSRGVVPASFRARFLCKIQNLIGDTSKKADTEVPNHIRSSPVSPCSQTESNSPQSPFKSNTRNCMTVTKSSNIPYTVMRFVKHL* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1094 697 Pfam Protein kinase domain 304 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1094 697 MobiDBLite consensus disorder prediction 1 42 - -
Psa5g1094 697 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 6 690 - -
Psa5g1094 697 MobiDBLite consensus disorder prediction 277 293 - -
Psa5g1094 697 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 6 690 - -
Psa5g1094 697 MobiDBLite consensus disorder prediction 584 617 - -
Psa5g1094 697 ProSiteProfiles Protein kinase domain profile. 303 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1094 697 Gene3D Transferase(Phosphotransferase) domain 1 300 605 - -
Psa5g1094 697 ProSitePatterns Protein kinases ATP-binding region signature. 309 332 IPR017441 GO:0005524
Psa5g1094 697 MobiDBLite consensus disorder prediction 649 673 - -
Psa5g1094 697 MobiDBLite consensus disorder prediction 1 31 - -
Psa5g1094 697 MobiDBLite consensus disorder prediction 271 293 - -
Psa5g1094 697 SUPERFAMILY Protein kinase-like (PK-like) 277 575 IPR011009 -
Psa5g1094 697 MobiDBLite consensus disorder prediction 640 673 - -
Psa5g1094 697 SMART serkin_6 303 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1094 697 MobiDBLite consensus disorder prediction 587 609 - -
Psa5g1094 697 PRINTS Tyrosine kinase catalytic domain signature 382 395 IPR001245 GO:0004672|GO:0006468
Psa5g1094 697 PRINTS Tyrosine kinase catalytic domain signature 419 437 IPR001245 GO:0004672|GO:0006468
Psa5g1094 697 PRINTS Tyrosine kinase catalytic domain signature 491 513 IPR001245 GO:0004672|GO:0006468
Psa5g1094 697 PRINTS Tyrosine kinase catalytic domain signature 533 555 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1094 Psa-Chr5 85216112 85225469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1094 262 566 MAP Kinase Kinase Kinase AT5G66850 66.557 3.08e-145 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa5g1094 Pkinase 1.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1094 - - gmx:100781764 829.706