Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1086 ATGAAAGGAGAATACGTAGATCAACATTCTAAGCTTCACCAGTCACAGTTACAGTTACAGTCACAAACACAAAACAATCCATTTCTTCCTTTCCAGCTCTCTCATCATGAATGTCAAACAGTCGGTGAAGACGATAATCGTTCTGGCGGTGGCGCAGCCGCTCAGAAACCGAACTCTTCTGGCGATGGAGCTACCATTGAGGTTGTCAGGCGGCCTAGGGGACGTCCGCCTGGATCCAAAAACAGGCCTAAACCGCCTGTTATTATAACACGCGATCCTGAACCTGCTATGAGTCCTTTTATTCTGGAAGTTTCTGCAGGAAACGACGTCGTTCAAGCGGTTGCTGAGTTTAGTCATCGTAGGAATATCGGCTTATGCGTTTTAACCGGTTCAGGAGCTGTTGCTAATGTTACTCTTCGTCAACCGTCAACTACGCCGGGAACCACCGTTACTTTTCACGGCCGTTTTGATATTCTATCCTTAACCGCTACTTTTCTTCCTCAATCATCCGGTGGTTCTCCAACGGTTCCTAACGGCTTCTCCATCTCGCTCGCCGGTCCGCAGGGTCAGATCGTCGGAGGAATTGTTGCTGGAAACTTGATAGCTGCGGGAACCGTGTTTGTGATTGCTGCTTCGTTTAATAATCCATCTTATCATAGGTTGCCTCCGGAAGAAGAAGGCGGAAACTCGGTGTCAGGCGGCGATGGAATTTCTCCACCTGTTTCCGGTGCGGTGGATAGCGGTCAAGGTCAAGGCGGCGAGTCGTGCGGGATGTCTATGTACAGCTGTCACTTGCCACCGTCAGATGTGATTTGGACTCCATCGGCAAGACCACCACCTTACTGA 846 0.4976 MKGEYVDQHSKLHQSQLQLQSQTQNNPFLPFQLSHHECQTVGEDDNRSGGGAAAQKPNSSGDGATIEVVRRPRGRPPGSKNRPKPPVIITRDPEPAMSPFILEVSAGNDVVQAVAEFSHRRNIGLCVLTGSGAVANVTLRQPSTTPGTTVTFHGRFDILSLTATFLPQSSGGSPTVPNGFSISLAGPQGQIVGGIVAGNLIAAGTVFVIAASFNNPSYHRLPPEEEGGNSVSGGDGISPPVSGAVDSGQGQGGESCGMSMYSCHLPPSDVIWTPSARPPPY* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1086 281 MobiDBLite consensus disorder prediction 1 88 - -
Psa5g1086 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 215 IPR005175 -
Psa5g1086 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 2 280 - -
Psa5g1086 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 280 IPR014476 GO:0003680
Psa5g1086 281 CDD DUF296 99 213 IPR005175 -
Psa5g1086 281 MobiDBLite consensus disorder prediction 10 33 - -
Psa5g1086 281 Gene3D - 98 232 - -
Psa5g1086 281 ProSiteProfiles PPC domain profile profile. 94 234 IPR005175 -
Psa5g1086 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 228 - -
Psa5g1086 281 PIRSF ESCAROLA 1 273 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1086 Psa-Chr5 84509617 84511888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1086 1 281 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 57.586 3.91e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1086 - - gmx:100788098 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1086 5 84509617 84511888 Psa5g1086 5 84509617 84511888 ECH