Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1076 ATGGGTGTCACGGTTCCACAAAACCTAACCAGAAAAATGGATGTCACGGTTCCAGAAAACCTAACCAGAGAACAGTACGTGTACCTCGCAAAACTCGCAGAACAAGCAGAGCGCTACGAAGAGATGGTATCCTTCATGCAGAAGCTAGTGGTAGTGTCCACACCTTCCTCAGAGCTTAGCGTCGAAGAGAGGAACCTAATATCCGTCGCTTACAAGAACGTGATAGGGTCGCTACGTGCGGCGTGGAGAATCGTTTCGTCGATTGAGCAGAAGGAAGAAGGTAGAAAGAATGACGACCATGTTGTGCTTGTTAAGGATTATAGATCTAAAGTTGAATCGGAGTTGTCCAATGTTTGTGCCAGTATTCGCTGGACTCCTGGACTCGAATCTTATACCTTCGGGTTCTTCGAAAAATCTGCGGCTGAGGATACTATTTGTCTTACAAGCGCTGCACAGGATATTGCTGCTGCTGATCTTCCATCTACTCATCCTATAAGATTGGGTTTGGCTCTCAATTTCTCGGTTTCTATTATGAAATTCTCAACCAGTCTGACAAAGCTTGTGCCATTGCCAAACAGGCTTTTGAGGAAGCAATTGCTGAACTGGACACCGTTGGGAGAAGAATCCTACAAAGACAGCACACTTTATATGCAACTTTTGAGAGACAACCTCACCCTTTGGACTTCTGATGTCCAGGACCAGTAG 705 0.4567 MGVTVPQNLTRKMDVTVPENLTREQYVYLAKLAEQAERYEEMVSFMQKLVVVSTPSSELSVEERNLISVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVVLVKDYRSKVESELSNVCASIRWTPGLESYTFGFFEKSAAEDTICLTSAAQDIAAADLPSTHPIRLGLALNFSVSIMKFSTSLTKLVPLPNRLLRKQLLNWTPLGEESYKDSTLYMQLLRDNLTLWTSDVQDQ* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1076 234 ProSitePatterns 14-3-3 proteins signature 1. 64 74 IPR023409 -
Psa5g1076 234 Gene3D - 4 126 IPR036815 -
Psa5g1076 234 Gene3D - 129 234 IPR036815 -
Psa5g1076 234 Coils Coil 29 49 - -
Psa5g1076 234 SUPERFAMILY 14-3-3 protein 22 230 IPR036815 -
Psa5g1076 234 SMART 1433_4 23 234 IPR023410 -
Psa5g1076 234 Pfam 14-3-3 protein 29 122 IPR023410 -
Psa5g1076 234 Pfam 14-3-3 protein 149 228 IPR023410 -
Psa5g1076 234 PANTHER BNAC02G00320D PROTEIN 20 122 - -
Psa5g1076 234 PANTHER BNAC02G00320D PROTEIN 136 233 - -
Psa5g1076 234 PANTHER 14-3-3 PROTEIN 20 122 IPR000308 -
Psa5g1076 234 PANTHER 14-3-3 PROTEIN 136 233 IPR000308 -
Psa5g1076 234 PRINTS 14-3-3 protein zeta signature 58 87 IPR000308 -
Psa5g1076 234 PRINTS 14-3-3 protein zeta signature 107 131 IPR000308 -
Psa5g1076 234 PIRSF 14-3-3 134 234 IPR000308 -
Psa5g1076 234 PIRSF 14-3-3 18 123 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1076 Psa-Chr5 83753931 83755563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1076 21 232 14-3-3 family AT5G10450 60.924 6.94e-91 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1076 K06630 - mnt:21384884 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1076 5 83753931 83755563 Psa5g1076 5 83753931 83755563 ECH