Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1071 ATGGGTTATCTTTTCTGCAATGCAGAGTCTGCAATTGCTACCTGCGATCCACACTATTGGGATCTCAAAAAAAGAAACAAATCCATAACAAATGGAACCCACACTATCAAGGAGTTTCTCTACACCGACCTCGTCGCCGCCACGAACGGTTTCTCCGATGATAGCTACTTAGGTAAAGGCAGCCACGGGAGAGTTTACAGAGCAACGTTAAACGGAGGCAATCTAGTCGTCGCCGTTAAAACTACTAAGCAAACTGCAAAGATTACACATAACCACGCCGTGAACTGCACCGGTTGCGGTAACTGTACGAGTCCTGCTGAGAATGAGATCGAGATTCTTTCTCAAGTTCCAAGTTTTCGCCTCGTGAATCTCATCGGTTACTGCACCGACCCAAACGGCAATAAATTAATTGTCGTTGAATACATGCCTAACGGTTCGCTTCATGATTTATTACATTCCGCGTCTAAACCGCCCGGTTGGACCAGACGAGTCCGGTTCGCATTGCAAGTTGCAAAAGCGGTTCGGTCATTACACGGTTCTAACCCTCCGGTGATCCACCGTGATATTAAATCGTCCAACGTTTTAATCGATCAGAATTGGAAAGCAAGACTCGGTGACTTCGGTTTAGCACTTAGAGGACACGTGGAGGACGTTCGTGTTAAGTGTACGCCACCCGCGGGGACGTTAGGGTACCTCGATCCAGGCTATCTTGCGCCGGGGGATCTTAGTGCGAAGAGTGATGTCTTCAGTTTTGGGATCTTGTTGTTGGAGATAATCAGTGGAAGAAATGCTATCGATGTTAATTACAGTCCTCCTTCGGTTGTTGACTGGGCGGTGCCTCTGATTAGAAGAGGCGACTTCGCCGGAATCTGTGATCGGAGAATAGGAACTCCGTCGGATATGTCCGTGATGCGGCAGATTGCGGTACTTGCTGCAAGATGTGTTAGATCGACAGCGGAGAAGCGGCCGGCGATGGTGGAGGTTGTGGAGTGTCTTAAACTTGCCGGGAAGAAGATTCACTCGTCGCCGATTTGGAATAGTTTCAGGTGCCGCGTGACACGAGTGGAGAGTTCGCAACCGTTGATGAAGTGGGAAGCCTATGATCAAGATTATGATTATGATTATCATGATGATTGTAATGATTGGAATAATAAGAGTGATGAGGTTGTTGTGAAAATTGTAAAGAGTGGAAGCAGTAGCAGAAGGAAGAGTAAAGTATCCAGTGTAGCGAGTGCCGAGTCTGTGAGTAAACACTCCAAGAAAGTGGTTAGATCTAAGCCGTCGAAGAAAATAACTAGATCTAAGACCGTTGGTTCTTCTTCTAGTTGTGCTAGTAGCTGTGGTAGGAAAAGTGGGATTCAAATTCAAATAGTTTCGGAGAAAACGCGTGCAATGAAGCTGAAAAAGTCAAAGTCAACGGGGATGTTGCAAGATCCTCATTTGGGTGAGACTGAGAGGATAGCATTAACCATGTCAAAGTTGGTTATTACAGATAATAAGAAGTTGGAAAAGAAGATGCTTGAAAAACCGTTGGTTTACTCGCATGGTTGGGAGTCTGAATAA 1563 0.4594 MGYLFCNAESAIATCDPHYWDLKKRNKSITNGTHTIKEFLYTDLVAATNGFSDDSYLGKGSHGRVYRATLNGGNLVVAVKTTKQTAKITHNHAVNCTGCGNCTSPAENEIEILSQVPSFRLVNLIGYCTDPNGNKLIVVEYMPNGSLHDLLHSASKPPGWTRRVRFALQVAKAVRSLHGSNPPVIHRDIKSSNVLIDQNWKARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPGYLAPGDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIRRGDFAGICDRRIGTPSDMSVMRQIAVLAARCVRSTAEKRPAMVEVVECLKLAGKKIHSSPIWNSFRCRVTRVESSQPLMKWEAYDQDYDYDYHDDCNDWNNKSDEVVVKIVKSGSSSRRKSKVSSVASAESVSKHSKKVVRSKPSKKITRSKTVGSSSSCASSCGRKSGIQIQIVSEKTRAMKLKKSKSTGMLQDPHLGETERIALTMSKLVITDNKKLEKKMLEKPLVYSHGWESE* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1071 520 SMART serkin_6 51 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1071 520 MobiDBLite consensus disorder prediction 402 437 - -
Psa5g1071 520 SUPERFAMILY Protein kinase-like (PK-like) 37 364 IPR011009 -
Psa5g1071 520 Pfam Protein tyrosine and serine/threonine kinase 55 332 IPR001245 GO:0004672|GO:0006468
Psa5g1071 520 Gene3D Phosphorylase Kinase; domain 1 35 141 - -
Psa5g1071 520 PANTHER OS01G0750732 PROTEIN 1 504 - -
Psa5g1071 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Psa5g1071 520 PANTHER - 1 504 - -
Psa5g1071 520 Gene3D Transferase(Phosphotransferase) domain 1 142 346 - -
Psa5g1071 520 ProSiteProfiles Protein kinase domain profile. 51 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1071 520 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1071 Psa-Chr5 83340077 83342120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1071 17 343 Receptor kinase-like Gene Family AT3G59420 39.759 5.83e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Psa5g1071 PK_Tyr_Ser-Thr 5.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1071 - - cam:101503747 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1071 5 83340077 83342120 Psa5g1071 5 83340077 83342120 ECH