Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1058 ATGAGCCGAGCCATGTCATTCGAAACCAAAGAACCGGTTCTCGAAACCATGCTTTCAGAAAGTGAAATACAATACCTCATTTCCCTCATTAACCAACCAGGAGATCCGACCAGTCCTAGCTCCGGTTCACAGGGTTCAAACCGGACGGTTTACTCTTCAGAAGAAAAAAAGCTGAGGCGCATGAAGTCGAACCGGGAAGCAGCTCAACGGTCCCGTTGCAGAAAGAAGAAGCATTTAGAGAACATCACGAACCGGTTGAACCGGTTGAGAATTGAAAACCAAGAACTAAAAAACCAACTATCCTTCACCATGAATCAACATCTTCTACTTTCCCTTGAGAATGATCAGTTAATATCCGAATCCATTGCTCTTTTGGCAACACTTTCAGATTTATGTGCCATTTTAAGCAACACCTTACCTCTATAA 426 0.4319 MSRAMSFETKEPVLETMLSESEIQYLISLINQPGDPTSPSSGSQGSNRTVYSSEEKKLRRMKSNREAAQRSRCRKKKHLENITNRLNRLRIENQELKNQLSFTMNQHLLLSLENDQLISESIALLATLSDLCAILSNTLPL* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1058 141 MobiDBLite consensus disorder prediction 52 68 - -
Psa5g1058 141 SMART brlzneu 52 116 IPR004827 GO:0003700|GO:0006355
Psa5g1058 141 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 59 74 IPR004827 GO:0003700|GO:0006355
Psa5g1058 141 Coils Coil 79 106 - -
Psa5g1058 141 MobiDBLite consensus disorder prediction 29 51 - -
Psa5g1058 141 PANTHER BZIP TRANSCRIPTION FACTOR 44 19 139 - -
Psa5g1058 141 CDD bZIP_plant_GBF1 57 107 IPR045314 GO:0003700|GO:0006355
Psa5g1058 141 Gene3D - 54 108 - -
Psa5g1058 141 Coils Coil 51 71 - -
Psa5g1058 141 MobiDBLite consensus disorder prediction 29 74 - -
Psa5g1058 141 Pfam Basic region leucine zipper 53 100 IPR004827 GO:0003700|GO:0006355
Psa5g1058 141 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 54 101 IPR004827 GO:0003700|GO:0006355
Psa5g1058 141 PANTHER BZIP TRANSCRIPTION FACTOR 19 139 - -
Psa5g1058 141 SUPERFAMILY Leucine zipper domain 56 110 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1058 Psa-Chr5 81451211 81452201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1058 12 135 bZIP Transcription Factor Family AT3G49760 36.641 6.19e-20 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g1058 bZIP_2 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1058 - - cam:101509317 212.231