Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1055 ATGACTCCTACTACTAACAAACCTTCATCTCCGAACCAATCGATTCAGCAGCGTAGACTTGCTAGACAGAGGATGTTGTGTTACCCTAACGATCAAGAAGGTGAAACCTTTCATTCAACGGTGGCTGTTACTATTTCGTTACCGGCTTCTCCTCGTCGTTCTAGCTCTTACAGTAGGTCTTCTTCTCCTGTTTTTCCTCAACCGCTTCCGTTACCGTTACCGGAATCGCCGTTGACCAGACGACCTGATAATCTTGCTACGTTACCGACTTCAAGGTTATTAATTAGTAAAGATACTAGAAAACACTCTCATGACCATTTAGATGAAGCTATTTCCAACTTGAAGATGCAATTTACTGCTACGAGTACCCCAACTAGCATATTCTCCAGTCCTATTACTAGTTCTGGCAGATTAAGCAGTGGAAATTTATCCGATCCTGCCATCAATTTTCCTCGAGATTTTAATGACATTTCGAGGCTTCCCGCTAAAACTTCTCATAGCTCGGGGAGCCACAGTCCTAAACAGCAAAACACTATCCAAGGGGGGTCTCATTCTCACCACTCTAAGATTTACTCCAGGGTGTCGTCTGAAAATAACCGTGCCGATGCACATCCACTGCCCCTTCCACCTCCAACGAGAGCTTTACCACGGCCACAACAACCAATGAAGAGTCAATGGCAGAAAGGAAAACTAATTGGACGAGGATCGTTTGGAAATGTTTATCATGCAACTAACCTAGAGACTGGAGCCTCATGTGCCATGAAAGAGGTGTATCTGTTTCCCGAAGATCCTAAATCGGATGACTATTTAAAGCAACTCAGCCAGGAAATCGGGACTCTTGGTCTGCTACACCACCCCAACGTTATGCAATATTATGGCAGTGAATTAGTTGGTGATCAATTGTGCATGTATATGGAATATGTCAATCCTGGATCACTTCTGAAGTTTATGCAAGAACATAATGGGGCTCTGACAGAACCCGTGGTTCGCAATTTCACTAGGCATATTCTCTCTGGATTGGCGTACTTGCATAGTACCGAGACTATCCACATGGACATTAAAGTTGCGAACTTGCTAGTGGATCCATCAGGCATTGTCAAGCTTGCAGATTTTGGGGTGTCAAAAACTATGACAGAGAAATCATATGAACTATCGCTGAAAAGAAGTCCCTACTGGATGTCGCCAGAGCTCATGATGGCCACCTTCATGAAAAAGACCGATCCCAGCGTCACCACGGCTGTTGATATATGGAGCTTAGGATGCACCGTCATCGAAATGCTGACCGGAAAATCCCCATGGAGCGAGTTTTCAGGGAATCAAGTCGTGTTCAAGGCACTGAACAGATCCCCGGACATACCCGAGACATTATCGCCGGAAGGGCAGGATTTCCTTGAGCAGTGTTTCCAAAGGAACCCTGCAAACCGACCATCTGCAGCAGTGCTTCTAACACATGCCTTTGTACAAAATCTGCATGAACAAGATGCTATAGTTCAGTCACTAGGCAGCCATAAAGAACAGACCCTGCTCAAAGATGAATCGCGTAAACATGATCCAGGAAACAGTTCAAAAGTTAGCCGTGGTGTAGCTCCAGCTTTCTTTCGTGCACGAATTTTTCGCAAAATTCAAAATTTAATCGGGGGAACTGGAATACGGAGCAAACAAGCACTCGATAGGACCACTTCCATGTTTTGA 1692 0.4492 MTPTTNKPSSPNQSIQQRRLARQRMLCYPNDQEGETFHSTVAVTISLPASPRRSSSYSRSSSPVFPQPLPLPLPESPLTRRPDNLATLPTSRLLISKDTRKHSHDHLDEAISNLKMQFTATSTPTSIFSSPITSSGRLSSGNLSDPAINFPRDFNDISRLPAKTSHSSGSHSPKQQNTIQGGSHSHHSKIYSRVSSENNRADAHPLPLPPPTRALPRPQQPMKSQWQKGKLIGRGSFGNVYHATNLETGASCAMKEVYLFPEDPKSDDYLKQLSQEIGTLGLLHHPNVMQYYGSELVGDQLCMYMEYVNPGSLLKFMQEHNGALTEPVVRNFTRHILSGLAYLHSTETIHMDIKVANLLVDPSGIVKLADFGVSKTMTEKSYELSLKRSPYWMSPELMMATFMKKTDPSVTTAVDIWSLGCTVIEMLTGKSPWSEFSGNQVVFKALNRSPDIPETLSPEGQDFLEQCFQRNPANRPSAAVLLTHAFVQNLHEQDAIVQSLGSHKEQTLLKDESRKHDPGNSSKVSRGVAPAFFRARIFRKIQNLIGGTGIRSKQALDRTTSMF* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1055 563 MobiDBLite consensus disorder prediction 1 32 - -
Psa5g1055 563 ProSitePatterns Protein kinases ATP-binding region signature. 232 255 IPR017441 GO:0005524
Psa5g1055 563 MobiDBLite consensus disorder prediction 1 20 - -
Psa5g1055 563 Pfam Protein kinase domain 227 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1055 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 94 548 - -
Psa5g1055 563 Gene3D Transferase(Phosphotransferase) domain 1 217 529 - -
Psa5g1055 563 SUPERFAMILY Protein kinase-like (PK-like) 205 501 IPR011009 -
Psa5g1055 563 MobiDBLite consensus disorder prediction 162 199 - -
Psa5g1055 563 MobiDBLite consensus disorder prediction 49 64 - -
Psa5g1055 563 MobiDBLite consensus disorder prediction 162 227 - -
Psa5g1055 563 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 94 548 - -
Psa5g1055 563 MobiDBLite consensus disorder prediction 49 77 - -
Psa5g1055 563 ProSiteProfiles Protein kinase domain profile. 226 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1055 563 SMART serkin_6 226 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1055 Psa-Chr5 81329501 81332588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1055 122 489 MAP Kinase Kinase Kinase AT5G66850 49.412 8.78e-128 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa5g1055 Pkinase 7.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1055 - - gmx:100781764 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1055 5 81329501 81332588 Psa5g1055 5 81329501 81332588 ECH