Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1013 ATGGTTGCACTTGCAGCAATAGCAAGAAGCTTCCATTTTCAGAGACATACTTTAATCAACATCAATTCCGTTGGTAAATCTTCGACAGCAGGGCACTACTGGCTCAGGCCTGCTGGTGCAGGAACAGGAGTCACACCACGTTATAAGCAAATTTGTACAGCGACACAACAGCGACCGACGTGGCTTCCTGGACTTGACCCTCCAACTTATCTTGATGGAACTTTGGCCGGAGATTTTGGGTTCGACCCACTTGGGCTTGGAGAGGATCCTGAAAGCTTAAAGTGGTTTGTGCAAGCAGAATTGGTTCATTCTCGGTTTGCAATGCTTGGGGTATTGGGAATTCTAGTCACAGATCTACTTCGTCTCGCAGGAGTTAGTACCATACCAGTTTGGTTTGAAGCTGGTGCAGTAAAATACGAGTTTGCGAACACAGGGACGCTTGTCGCTGTTCAACTACTTTGGATGGGGTATGCTGAAACAAGAAGGTACATGGATTTTGTAAGTCCTGGATCTCAAGCTAAAGAAGGTTCCTTCTTTGGATTGGAAGCTTCACTGGAAGGCTTAGAGCCAGGGTACCCTGGGGGTCCTCTGCTAAACCCTCTTGGTCTAGCTAAAGACAGTAAAAATGCTCATGGCTTGAAGCTTAAAGAGATCAAGAATGGACGACTTGCAATGGTGGCAATACTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGAAAACCTTGTGGAGCATCTCTCCAATCCATGGCATAAAACTATTATTCAGACCCTTGCAAGTTCTAGTTCTTAG 804 0.4565 MVALAAIARSFHFQRHTLININSVGKSSTAGHYWLRPAGAGTGVTPRYKQICTATQQRPTWLPGLDPPTYLDGTLAGDFGFDPLGLGEDPESLKWFVQAELVHSRFAMLGVLGILVTDLLRLAGVSTIPVWFEAGAVKYEFANTGTLVAVQLLWMGYAETRRYMDFVSPGSQAKEGSFFGLEASLEGLEPGYPGGPLLNPLGLAKDSKNAHGLKLKEIKNGRLAMVAILGIFVQASVTHVGPIENLVEHLSNPWHKTIIQTLASSSS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1013 267 Gene3D Chlorophyll a/b binding protein domain 60 267 - -
Psa5g1013 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 15 264 IPR001344 GO:0009765|GO:0016020
Psa5g1013 267 Pfam Chlorophyll A-B binding protein 67 235 IPR022796 -
Psa5g1013 267 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 15 264 - -
Psa5g1013 267 SUPERFAMILY Chlorophyll a-b binding protein 53 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1013 Psa-Chr5 76151995 76153349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1013 50 259 Chloroplast and Mitochondria Gene Families AT3G61470 47.393 5.63e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1013 K08911 - gmx:100804934 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1013 5 76151995 76153349 Psa5g1013 5 76151995 76153349 ECH