Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0997 ATGAATTTCAAGGGGTTTGGGAATGAACCGGGAGCCTCCGTCGCTGGCGGCGGTGGGAGGACTACCGCGGGGAGTTTTTCTCTAGCGCGGCAATCGTCGGTGTACTCTTTGACAATTGATGAATTTATGAATAGTATGGGTGGTTCTGGGAAAGATCTTGGATCAATGAACATGGATGAATTGTTGAAGAACATTTGGACTGCAGAAGAGGTTCAAACAATGGGGGGTGAAGAGGCTGTTAGTAATCATTTGCAAAGGCAAGGCTCTTTGACGCTGCCGCGGACGCTTAGTCAGAAGACAGTTGATGAAGTTTGGAAGGATATTTCGAAGGATTATGGTCCTAGTTTGGCTGCACCGCAGGCTCAAAGACAACCAACTTTGGGGGAAATGACTTTGGAAGAGTTTTTGGTTAGAGCTGGTGTTGTTAGGGAAGATGCGAAACCGAATGATGGGGTTTTTCTCGATCTAGCGCGTGTTGGGAATAATAGTAATTTGGGTTTGGCTTTTCAGGCTCAGCAGATGAATAAAGTTGCTGGTTTTATGGGTAATAATAATAGAATGAATGGTACTAATGATGATCCACTTGTTGGCCTTCAGAGTCCTACTAATTTGCCATTGAATATGCCTTTGTCTAGTAATCAAGCACTGAGAGGTGGAATTATGGGGCTTTCTCCTGATCAAGGCATGAATGCTAATCTTGTGCAAGGCGGAGGGATTGGTATGGTTGGTTTGGCACCTGGGGCTGTTCAAATTGGTGCTGTGTCACCGGCTAACCAAATATCTGGTGATAAACTTGGAAAGTCTAATGGGGATACTTCTTCTGTGTCGCCGGTTCCTTATGTATTTAATGGTGGTATGCGAGGAAGGAAGGGTAATGGAGCTGTGGAGAAGGTAATTGAAAGGAGGCAGAGAAGAATGATAAAGAATAGAGAGTCAGCTGCTAGATCCCGCGCTCGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTAGCAAAATTAAAAGAAGAGAATGAAGAACTTCAGAAAAAGCAGGAAGAAATCATGGAAATTCAGAAAAATCAAATGTCATGA 1074 0.4413 MNFKGFGNEPGASVAGGGGRTTAGSFSLARQSSVYSLTIDEFMNSMGGSGKDLGSMNMDELLKNIWTAEEVQTMGGEEAVSNHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGPSLAAPQAQRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFLDLARVGNNSNLGLAFQAQQMNKVAGFMGNNNRMNGTNDDPLVGLQSPTNLPLNMPLSSNQALRGGIMGLSPDQGMNANLVQGGGIGMVGLAPGAVQIGAVSPANQISGDKLGKSNGDTSSVSPVPYVFNGGMRGRKGNGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMEIQKNQMS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0997 357 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 7 159 IPR043452 GO:0003700|GO:0045893
Psa5g0997 357 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 207 356 IPR043452 GO:0003700|GO:0045893
Psa5g0997 357 SUPERFAMILY Leucine zipper domain 301 349 IPR046347 GO:0003700|GO:0006355
Psa5g0997 357 Pfam bZIP transcription factor 301 351 IPR004827 GO:0003700|GO:0006355
Psa5g0997 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 299 350 IPR004827 GO:0003700|GO:0006355
Psa5g0997 357 Gene3D - 299 355 - -
Psa5g0997 357 CDD bZIP_plant_BZIP46 301 355 - -
Psa5g0997 357 Coils Coil 317 354 - -
Psa5g0997 357 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 159 - -
Psa5g0997 357 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 207 356 - -
Psa5g0997 357 SMART brlzneu 297 357 IPR004827 GO:0003700|GO:0006355
Psa5g0997 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 304 319 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0997 Psa-Chr5 74737006 74740771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0997 28 333 bZIP Transcription Factor Family AT1G45249 46.154 2.57e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g0997 bZIP_1 2.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0997 K14432 - gmx:100819313 447.203