Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0990 ATGTCGTCTATGAACTACATCCAGAAAGGCCTCTTATTCAAAAAACCAAATAGCCAACAAGACTTCATCGATAATCTATTGAACAAGCTCAAACACTCCCTGTCTCTTGCTCTATTCCATTTCTATCCTCTATCCGGCCGTCTTGTTACACAAAAATCTCAAGACCCTCCATCTTATTCTATTTTCGTCGATTGCAGTAACGGTAACCCCGGAGCTAGGTTCATCTACGCAACTTTGGATATAACCGTATCTGATATCCTCACGTCAATTGATGTCCCACCTGTTGTTAAGTCATTGTTTGATCTGAACAAAGCAATCAATCACGACGGTCACACCTTACCTTTGTTATCTGTCCAAGTCACCGAGCTAGTAGATGGTGTTTTCATAGGTTGTTCCATGAATCACTATATTGGTGATGGAACTTCTTATTGGAATTTCTTTAATACATGGTCTGAAATATTTCAAGCTCAAGGCCAAGGCCATGATCATGAAAATGTTCCCATTTCACGGCAACCCTTTCACAATCGTTGGTTTCCTGAAGGTTATGGTCCGCTAATCAATCTTCCATTCAAACATTACGACGAGTTTGTAAGTAGATTTGAACCACCTAAGCTGAGAGAGAGATTCTTCCACTTTACATCAGAGTCTATTGCAGAACTTAAAGCAAAGGCTAACAGGGAGTGTAAGACAAACAAAATCTCTTCGTTCCAATCCTTATCGGCACATGTTTGGAGAAGTATAACTCGTGCTCGCCACCTAACAAATGATCGGAAAACAAGTTGTATGGTGGCGGTAAACAACCGACCGAGAATGAAACCGCCTCTTCCTGAAGAGTACTTTGGGACCTCAGTTGATACGGTGACTGCAGAAGCGACGGCAGGAGAGTTGCTTGAGAATGATTTGGGATTGGTAGCATGGAAGATTCATGTGGCTGTTACAAAGCATGATGACTTAGAGATTCGGAAGAGTGTAGAAAAGTGGTTAGAGTCTCCTGTAATACTCGACCTTAATCGGCACTTTGATCCGTTAAGTAGTGTGGCAATGATAAGTTCACCAAGATTCAATATGTATGGGAATGAATTTGGAATGGGGAAGGCAGTGGGTGTTTTGAGTGGTTATGCAAACAAATGTGATGGGAATGTGACAGCATATGAGGGATATGAAGGAGGAGGAAGTATGGATTTGGAAATTTCTCTTTCTTCAAATGTTATGACAGAGCTGGAATTGGATGAGAACTTCATGAATGCAGTTTCTGTGAACAATATGCTAGGTGCTTCAAGAGGACACACTCTTAATGAAAATTAA 1305 0.4107 MSSMNYIQKGLLFKKPNSQQDFIDNLLNKLKHSLSLALFHFYPLSGRLVTQKSQDPPSYSIFVDCSNGNPGARFIYATLDITVSDILTSIDVPPVVKSLFDLNKAINHDGHTLPLLSVQVTELVDGVFIGCSMNHYIGDGTSYWNFFNTWSEIFQAQGQGHDHENVPISRQPFHNRWFPEGYGPLINLPFKHYDEFVSRFEPPKLRERFFHFTSESIAELKAKANRECKTNKISSFQSLSAHVWRSITRARHLTNDRKTSCMVAVNNRPRMKPPLPEEYFGTSVDTVTAEATAGELLENDLGLVAWKIHVAVTKHDDLEIRKSVEKWLESPVILDLNRHFDPLSSVAMISSPRFNMYGNEFGMGKAVGVLSGYANKCDGNVTAYEGYEGGGSMDLEISLSSNVMTELELDENFMNAVSVNNMLGASRGHTLNEN* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0990 434 Gene3D - 1 186 IPR023213 -
Psa5g0990 434 Pfam Transferase family 3 412 - -
Psa5g0990 434 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 417 - -
Psa5g0990 434 Gene3D - 194 409 IPR023213 -
Psa5g0990 434 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0990 Psa-Chr5 74339702 74344813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0990 13 408 Monolignol Biosynthesis Gene Families AT5G48930 29.369 9.46e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0990 - - gmx:100788297 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0990 5 74339702 74344813 Psa5g0990 5 74339702 74344813 ECH