Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g0988 | ATGGCAACAAAGAGAAACCACTCAACCAAATGGATAATCCTCTCACTGTTACTACTCACAACAACATTCTCCAACTCCACCAAACTCAAAACAACACCCTCGCCTCTCTCAGATCCTACTTCCCTCTTAGCATTCAAATCAAAAGCTGATATAAACAACCACCTCAACTTCACCACCAAAACTCCTTTCTGCAACTGGCAAGGTGTAGAATGCAACGGACCTAAAGTAGTTCGTCTCGTCCTCCGAAGCCTAGATCTCGGCGGCGTCTTCGCTTCTCACACATTATCCCTTCTCGACCAGCTCCGTGTTCTCAGTTTACAGAACAACTCCCTCACCGGAGCCATCCCTGACCTCTCCGGTCTCTTCAATCTCAAAACGCTCTTCCTTGATAACAACCACTTCACTGGTTCACTTCCGCTTTCACTTTTCACTCTTCACAGACTCAAAACCATAGATTTCTCTCACAACAATCTCTCTGGAGATATACCTATAGATTTCATAAACCTCGACCGTCTTTACTATCTTCGTTTAAGCTTCAACGCTTTCAATGGTACTATTCCTCCTTTTAATCAGTCTTCTCTCCGAACTTTTGATGTCTCCGGTAACAATCTCTCCGGCGCAGTTCCGTTAACCACCACGCTGTCTCGTTTTCAGCCTTCTTCTTTTGCTTTAAACCCTAACCTCTGTGGAGAAATCATTCGGAGAGAATGTCGTCCAACAACGCCGTTTTTTGCTCCTACCTCGCCTCCGACAGTTGGAATCGGTCAGAGCGCGGATGTTCACGGTTTAATACGGCAGCCGTACGAGAAGAAACACAATCGGAAAGCGGCGATAATCGGATTCTCCACCGGGATAGTGTTTCTAATACTTTCCCTTACGTGTTTCGCGGTGGCAGTGAAGAAACAGAGGAAGAAGAAAGGTAAAGGCTCCTCCGGTTCGAGCGTGATGGCTTCGGATGCGGCGGCGACTGCGGAAGCTGCGGTTGTGATGCAAATGGAGCAAGAGAGGGAGTTAGAAGAAAAGGTGAAAAGAGCTCAAGTTGCTAAGAGTGGGAGTTTAATATTCTGTGCGGGTGAGTCACAGGTGTATACGCTGGACCAGTTGATGAAAGGATCTGCGGAGCTTTTAGGTAGAGGGTGTTTGGGTACAACTTACAAAGCAGTGTTGGATAACCGTTTGATTGTAACGGTGAAGCGTTTTGATTGTGGGAAAATGGGTGGACACGTAAGCAAAGAAGTGTTCGAGCGTCACATGGAATCAGTTGGTGGTCTTAGGCATCCAAATTTGGTTCCTCTAAGGGCTTATTTTCAAGCAAATCATGAGAGACTTATTATCTATGATTATCAACCCAATGGCAGTTTATTCTCTCTCATACATGGTTCCAGATCAAGCAGGGCAAGGCCATTGCACTGGACATCATGCTTAAAAATAGCAGAGGATGTAGCACAAGGGCTTTCATACATCCACCAGGCATGGAGACTGGTCCATGGCAATCTCAAATCCACCAATGTTCTTCTAGGACCCGATTTCGAAGCTTGTGTCACAGACTACTGCCTGTCTGTGTTGACTAATCCGTCTACTTTTGACGAGGTTGGTGATTCTGCACCCTATAGAGCTCCAGAAACTCGCACTCCAAATCACCAGCCGACCCCCAAATCCGATGTTTATGCTTATGGTATTTTGTTACTAGAGCTTCTGACTGGGAAATATGCCTCCGAGCTTCCATTCATGGTGCCTGGTGATATGTCAAAATGGGTGAGATCAATCAGGGATGACAATGGGAGCGAAGACAACAGAATGGATATGCTTCTTCAGGTGGCTACAACTTGTAGCTTGATCTCTCCTGAGCAGAGACCCACAATGTGGCAGGTCTTGAAGATGTTACAGGAAATCAAAGAGATTGTACTATTGGAGGATAGTGAAGTGGATGTACGCAGTAGTAATGTCGTTGCCATGTCTTAG | 1962 | 0.4602 | MATKRNHSTKWIILSLLLLTTTFSNSTKLKTTPSPLSDPTSLLAFKSKADINNHLNFTTKTPFCNWQGVECNGPKVVRLVLRSLDLGGVFASHTLSLLDQLRVLSLQNNSLTGAIPDLSGLFNLKTLFLDNNHFTGSLPLSLFTLHRLKTIDFSHNNLSGDIPIDFINLDRLYYLRLSFNAFNGTIPPFNQSSLRTFDVSGNNLSGAVPLTTTLSRFQPSSFALNPNLCGEIIRRECRPTTPFFAPTSPPTVGIGQSADVHGLIRQPYEKKHNRKAAIIGFSTGIVFLILSLTCFAVAVKKQRKKKGKGSSGSSVMASDAAATAEAAVVMQMEQERELEEKVKRAQVAKSGSLIFCAGESQVYTLDQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRFDCGKMGGHVSKEVFERHMESVGGLRHPNLVPLRAYFQANHERLIIYDYQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSTNVLLGPDFEACVTDYCLSVLTNPSTFDEVGDSAPYRAPETRTPNHQPTPKSDVYAYGILLLELLTGKYASELPFMVPGDMSKWVRSIRDDNGSEDNRMDMLLQVATTCSLISPEQRPTMWQVLKMLQEIKEIVLLEDSEVDVRSSNVVAMS* | 654 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g0988 | 653 | Pfam | Protein kinase domain | 374 | 626 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa5g0988 | 653 | Gene3D | Ribonuclease Inhibitor | 191 | 236 | IPR032675 | - | |
Psa5g0988 | 653 | ProSiteProfiles | Leucine-rich repeat profile. | 100 | 122 | IPR001611 | GO:0005515 | |
Psa5g0988 | 653 | Gene3D | Phosphorylase Kinase; domain 1 | 330 | 448 | - | - | |
Psa5g0988 | 653 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 14 | 640 | - | - | |
Psa5g0988 | 653 | Pfam | Leucine rich repeat | 123 | 181 | IPR001611 | GO:0005515 | |
Psa5g0988 | 653 | Gene3D | Transferase(Phosphotransferase) domain 1 | 450 | 647 | - | - | |
Psa5g0988 | 653 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 14 | 640 | - | - | |
Psa5g0988 | 653 | SUPERFAMILY | Protein kinase-like (PK-like) | 374 | 629 | IPR011009 | - | |
Psa5g0988 | 653 | SUPERFAMILY | L domain-like | 38 | 229 | - | - | |
Psa5g0988 | 653 | Gene3D | Ribonuclease Inhibitor | 36 | 190 | IPR032675 | - | |
Psa5g0988 | 653 | ProSiteProfiles | Protein kinase domain profile. | 370 | 636 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g0988 | Psa-Chr5 | 74281909 | 74285821 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g0988 | 38 | 648 | Receptor kinase-like Gene Family | AT5G43020 | 58.320 | 0.0 | 697 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Psa5g0988 | Pkinase | 2.6e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g0988 | - | - | cam:101511242 | 1107.43 |