Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0968 ATGAAAATCCAAATCATCTTCTTCTTCTTTCTCTTTTTATTCACCAAAACTATTTCATTATCATCAACAACAGACACACTCCAACAAGGCTCATCTCTGGCAGTTGAGAATCCTAATGACACCCTCATTTCATCCAACGGAGATTTCTCCGCCGGTTTCTTCCCGGTCGGAGACAACGCTTTCTGTTTCTCCGTCTACTTCACGAAATCCAAACAACCAACCGTTGTTTGGATGGCCAACCGAGACCAACCAGTAAACGGAAAATACTCGAAACTCTCACTTTTTAAAAACGGTAACCTCATTTTAACCGATGCAAAAAGAAAAAAGTCACCTTGGTCCATTTCGAATATTTCTCCTTTTCCTTTACAGTTAAAGCTTCGAAACGATGGTAACCTCGCTCTCGAAACGGTTACCAGCAACGTTACTGTCATTTGGCAAAGTTTTGATTCTCCAACCGATACACTTCTTCTTGGCCAACAAGTTACTGAACAAGCAAGCTTAGTTTCATCCAAAAGCGATAAAAACTATTCCACAGGCTTCTACAAACTATATTTTGATAACGACAACGCTCTTCGTCTTCTTTTCAAAGGTCCTTTGTTATCTAGCGTATACTGGCCAGCACCTTGGCTATTACCAATTGATGTAGGAAGGTCAACTTATAATGTTTCTAAAATCGCGCTAATCGATTCATTCGGTCATTTTATGTCCTCCGATGCATTCGAATTTTTCACCAGTGATTATCCTAAAAGAGTTCGTAGATTACTTAAAATGGATCATGATGGTAACTTGCGTGCTTACAGCTTCAATGAGAAAACTAAAACATGGGAAGTTTCATGGCAAGCTCTTCCCGAATCATGTTCGGTTCATGGTCTTTGCGGAGAAAATAGCATGTGTACTTATCATCCTGTGAATGGAAGAACATGTTATTGTTTAAAAGGTTACAAGTTGAAGAATCATAATGATTGGACACAAGGGTGTGAGCCTGAGTTTAAACCTTCTGATCTTTCATGTAATCGCGGTGAGTCTTACGGTTTTCTTCATCTTCAAAACATGGAATTGTATGGCTATGATTTGAGAATAGCAAAAGTCACAAGCTTGAAGCAATGTCAACAATTATGTTTGGATCTTTGTGAGAAATGCAAAGGTGTTCAATTCAAATTCAACCGCGATTCTACTTACGATTGTTTTCCGAAAACATTGTTGTTCAATGGAAGAGATTCTCATAATATTGATGGAGATGTTTATCTGAAATTGCCAAAAGTTACTCTTTTAGATTCCACTATGCCAATTAAACATACACCTATGAAGTGTTCCATTGAAAATTCTTCTCAAACCTTGAATAGATTCTATGAAAAACCAAGTAAAAACTCAACTTTGAGTTTCTTAACTTGGGTTGCATATGGGATAGGAGTGTTTGAAATTTCCATGATTTTCTTTGTTTGGTTCTTTTTGTTTAGAACCAATAAAAATCATGATGATAATGTTGATCAAATACAAAGACATCTTTTATCAGCAACAGGCTTTCAAAGATTCTCCTATTCCGAACTCAAAATCGCGACGAAGGGATTCACTAAAGAGATCGGCCGCGGAGGAGGAGGGATCGTTTACAAAGCTATACTCGAAGATGATCGCGTCGCAGCTGTTAAACGATTAAACGAAGCGGATCAAGGAGAAGCCGAATTCCTAGCCGAGATAAGCACAATTGGTATGTTGAACCACATGAACTTGATTGACATGTGGGGATATTGCGTCGAAGGGAAACATAGGATTCTGGTTTACGAGTTCATGGAACATGGTTCTTTAGCAGAAAATCTTTGTTCCAATTCACTTGATTGGAACAAAAGGTTTAATGTAGCTGTTGGAACAGCGAAAGGTTTAGCTTATTTACATGAAGAGTGTTTAGAATGGGTTTTACATTGTGACGTGAAGCCTCAAAATATTCTACTAGACACAAATTTTCAACCAAAAGTAGCTGATTTCGGTTTATCAAAGATTTTGAATAGAGACGAACGCGATAGTTCGGCTTTTTCAAGAATAAGAGGGACAAGAGGCTATATGGCACCAGAATGGGTTTATAATCTTAGAATCACTTCTAAGGTTGATGTTTATAGTTATGGGATTGTGTTGCTTGAAATGGTGAGTGGGAAAAGTCCAATGGAAATTCATAGTCTTGATAATAGTGGAGGAATTGAGCATCATAGAATGGTGAGCTGGGTTATGGATAAGGTGAAAAATGCACCTACGACAATGTTTTGGATTGAGGAGATTGTTGATGGTAATTTGGAAGGGAAATATGATGTGAATCAAGTTGAGAATTTGGTTAGAGTTGCTTTGAAGTGTGTGAAAGATGACATGAATGAAAGACCAACCATGAGTCAAGTTGTTGAGATGCTTCTTCAATCGCATGAAAAAGTTAGAGGACAAGGACAACCTCGTTAG 2439 0.3793 MKIQIIFFFFLFLFTKTISLSSTTDTLQQGSSLAVENPNDTLISSNGDFSAGFFPVGDNAFCFSVYFTKSKQPTVVWMANRDQPVNGKYSKLSLFKNGNLILTDAKRKKSPWSISNISPFPLQLKLRNDGNLALETVTSNVTVIWQSFDSPTDTLLLGQQVTEQASLVSSKSDKNYSTGFYKLYFDNDNALRLLFKGPLLSSVYWPAPWLLPIDVGRSTYNVSKIALIDSFGHFMSSDAFEFFTSDYPKRVRRLLKMDHDGNLRAYSFNEKTKTWEVSWQALPESCSVHGLCGENSMCTYHPVNGRTCYCLKGYKLKNHNDWTQGCEPEFKPSDLSCNRGESYGFLHLQNMELYGYDLRIAKVTSLKQCQQLCLDLCEKCKGVQFKFNRDSTYDCFPKTLLFNGRDSHNIDGDVYLKLPKVTLLDSTMPIKHTPMKCSIENSSQTLNRFYEKPSKNSTLSFLTWVAYGIGVFEISMIFFVWFFLFRTNKNHDDNVDQIQRHLLSATGFQRFSYSELKIATKGFTKEIGRGGGGIVYKAILEDDRVAAVKRLNEADQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRILVYEFMEHGSLAENLCSNSLDWNKRFNVAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDTNFQPKVADFGLSKILNRDERDSSAFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVLLEMVSGKSPMEIHSLDNSGGIEHHRMVSWVMDKVKNAPTTMFWIEEIVDGNLEGKYDVNQVENLVRVALKCVKDDMNERPTMSQVVEMLLQSHEKVRGQGQPR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0968 812 SUPERFAMILY Protein kinase-like (PK-like) 500 798 IPR011009 -
Psa5g0968 812 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Psa5g0968 812 CDD B_lectin 37 151 IPR001480 -
Psa5g0968 812 Pfam D-mannose binding lectin 74 163 IPR001480 -
Psa5g0968 812 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 3 802 - -
Psa5g0968 812 Gene3D Phosphorylase Kinase; domain 1 485 595 - -
Psa5g0968 812 ProSiteProfiles Protein kinase domain profile. 521 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0968 812 PIRSF SRK 1 810 IPR024171 GO:0004674
Psa5g0968 812 CDD PAN_AP_plant 334 419 - -
Psa5g0968 812 CDD STKc_IRAK 527 798 - -
Psa5g0968 812 Gene3D Transferase(Phosphotransferase) domain 1 596 810 - -
Psa5g0968 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 206 IPR036426 -
Psa5g0968 812 SMART serkin_6 521 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0968 812 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Psa5g0968 812 SMART blect_4 33 151 IPR001480 -
Psa5g0968 812 Gene3D - 19 149 IPR036426 -
Psa5g0968 812 ProSiteProfiles Bulb-type lectin domain profile. 18 147 IPR001480 -
Psa5g0968 812 PANTHER OS07G0415500 PROTEIN 3 802 - -
Psa5g0968 812 Pfam S-locus glycoprotein domain 249 317 IPR000858 GO:0048544
Psa5g0968 812 Pfam Protein kinase domain 525 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0968 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0968 Psa-Chr5 73164056 73167009 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0968 460 812 Receptor kinase-like Gene Family AT5G45780 36.464 2.50e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa5g0968 Pkinase 4.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0968 - - gmx:100816469 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0968 5 73164056 73167009 Psa5g0968 5 73164056 73167009 ECH