Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0966 ATGCACTACTTGATCTTTCTCCCTTTGCTTTTGTTTCTAAAACTTCCATCATCTTCAGCATTTGATACTTTGAATCAAGGTTCATCCCTCTCAGTGGAAGAACCAAAAGATATCATAGTATCACAAAATGGCATGTTCTGTGCTGGTTTCTATGCTGTTGGTGAAAATGGATATTCCTTTGCCATTTGGTTTTCCGAACCAAATCATCAAACAGAAAACCTTACCGTAGTATGGATTGCAAACCGTAACCAACCAGTCAACGGAAAAGGCTCCAAACTTCACCTTCTCGACAGTGGTAACCTTGTCTTAAGGGACACCGATGCCTCTCTTGTTTGGTCCACAAACACTGTCTCACTCTCTTCTATTGATCTCGTTCTTTTAAACACCGGTAACCTTGTTTTACGCGATGTAGACGGTGTTACTTTATGGCAAAGCTTTGACTCTCCTACTGATACGCTTTTGCCACGACAAGTTTTCAACAGACATTCAAGAATAGTTTGTTCAAGAAGTGAAACAAATAAGTCAGCTGGTTTTTATACGTTGTATTTCGACTTCGACAACATTCTTCGTCTTCTTTACGACGGTCCTGAAGTATCGAGCATTTATTGGCCGGATCCTTGGCTTACTGATTGGGCTGCTAAAAGGGCGGGTTACAATGACAGTAAAGTTGCGGTTTTGAACACTCTTGGAAATTTTAGTTCATCAGATGATTTCTATTTCACGACATCTGATTATGGAGATGAACTGATGCAGAGAAGACTAAGACTTGATCATGACGGAAACCTTCGCGCTTATAGTCGAAAACAAAGTGGAGAAAAGTGGTATGTTTCATGGCAAGCCAAATTAAGACCTTGTAAAATTCATGGTGTTTGTGGTGTAAATAGTTTGTGCTCTTATTATAGTGACAGTGTGAAATGTTCTTGTCTTCCGGGATATAAAATGAAGAATCCTCAAGATTGGGCCTATGGATGTGAACCAGAATTCTCTCTGTCATGCAACAAAACTCAATCTGAGTTTCTTGTGGTATCCAATGTGGAGTTATATGGCTATGATTATGGATTCGCGGTAAATTACACACTTGCTCAGTGCCAAGACTTTTGTTTGCAATTCTGCAATTGCAAAGGCATTCAATATACCTATGTCATATCCGGGAATGGTAAACCTGATACTCATTCATGTTACCCGAAGTTGCAGCTGCGAAATGCATATCGAATACCGTATTTCAAGGCTGATTTGTACTTGAAACTTCCGGCCAACAGTTCATACACTTACAAGGAAACAATGGATGATAAGAACAAACTGGCTTGTCCTGCGAATCCGAAAACAACAGTTCTTGAAAGATCATTCAACGAAGTTCGCGAAGGAAGGTATATTAAGTTTTTGCTTTGGTTTGTAGGGGGAATGGGAGGAATAGAAACCTTGTGCATACTTTTCATGTGGTTTTTCTTTGTAAGATCAAAAAATAATTCAGACACAAGAGTGTATAACAATATGTCCATAATTGGTTTTAGAAAATTCAGTTATTCTGAATTGAAAAAAGCAACAAAAAATTTTAGTCAAGAGATTGGAAAAGGTGCAGGAGGGGTTGTATACAAAGGTGTACTGTTAGATGAACGAGTTATAGCGGTGAAGAGACTCGCGGAAGCTAATCAAGGCGAAGAACAGTTTCTCGCAGAAGTAAGCAGCATTGGAAGACTTAACCATATGAATTTGATTGAATTGTGGGGTTATTGTGCAGAAGGAAAAAACAGAATTCTTGTGTATGAGTTCATGGAAAATGGTTCTTTAGCAGAACATTTAAGGTCTAGTGAATTGGATTGGACAAAAAGATTTGACATAGCTTTAGGTACTGCAAGAGGTTTGGCTTATATTCATGAAGAGTGTTTGGAGTGGATTTTGCATTGTGATGTGAAGCCACAGAACATACTTTTGGATTCTGATTATCAACCAAAGGTGGCAGATTTTGGATTGTCAAAGCTAAGAGACAGAAGTGATGCTAAATTCTCTAGTTTTTCGAAAATACGAGGAACAAGAGGTTATATGGCTCCTGAGTGGATATTGAATCATTCAATAACATCTAAAATAGATGTTTATAGCTATGGAATGGTTGTGTTGGAAATAATAACAGGAAAGAGTGCAACAAAGGATGTTGATATGGGAGATGGAGAAGAGAAACAAGGTTTGGTTGCATGGTTGAGAGAGAAAAGATATACAAGAAGTGCATGGGTTAATGAAATTATAGACCCTACCATTGAAGGAGGTTATGATGAAAGGGAAGTTGAAGCTTTGGCTGAAGTGGCTTTGCAATGTGTAGAAGAAGATAAGGACAAAAGACCTACCATGAGTCATGTGGTAGAAGTGCTTCTGAAAATAAGCCATGAAGCTGAAAATGATAATCAAGAATCAGCAACTAGCTAG 2418 0.3842 MHYLIFLPLLLFLKLPSSSAFDTLNQGSSLSVEEPKDIIVSQNGMFCAGFYAVGENGYSFAIWFSEPNHQTENLTVVWIANRNQPVNGKGSKLHLLDSGNLVLRDTDASLVWSTNTVSLSSIDLVLLNTGNLVLRDVDGVTLWQSFDSPTDTLLPRQVFNRHSRIVCSRSETNKSAGFYTLYFDFDNILRLLYDGPEVSSIYWPDPWLTDWAAKRAGYNDSKVAVLNTLGNFSSSDDFYFTTSDYGDELMQRRLRLDHDGNLRAYSRKQSGEKWYVSWQAKLRPCKIHGVCGVNSLCSYYSDSVKCSCLPGYKMKNPQDWAYGCEPEFSLSCNKTQSEFLVVSNVELYGYDYGFAVNYTLAQCQDFCLQFCNCKGIQYTYVISGNGKPDTHSCYPKLQLRNAYRIPYFKADLYLKLPANSSYTYKETMDDKNKLACPANPKTTVLERSFNEVREGRYIKFLLWFVGGMGGIETLCILFMWFFFVRSKNNSDTRVYNNMSIIGFRKFSYSELKKATKNFSQEIGKGAGGVVYKGVLLDERVIAVKRLAEANQGEEQFLAEVSSIGRLNHMNLIELWGYCAEGKNRILVYEFMENGSLAEHLRSSELDWTKRFDIALGTARGLAYIHEECLEWILHCDVKPQNILLDSDYQPKVADFGLSKLRDRSDAKFSSFSKIRGTRGYMAPEWILNHSITSKIDVYSYGMVVLEIITGKSATKDVDMGDGEEKQGLVAWLREKRYTRSAWVNEIIDPTIEGGYDEREVEALAEVALQCVEEDKDKRPTMSHVVEVLLKISHEAENDNQESATS* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0966 805 ProSiteProfiles PAN/Apple domain profile. 332 417 IPR003609 -
Psa5g0966 805 Gene3D Phosphorylase Kinase; domain 1 482 590 - -
Psa5g0966 805 CDD B_lectin 39 149 IPR001480 -
Psa5g0966 805 ProSiteProfiles Protein kinase domain profile. 516 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0966 805 Gene3D Transferase(Phosphotransferase) domain 1 591 805 - -
Psa5g0966 805 CDD STKc_IRAK 522 791 - -
Psa5g0966 805 SMART blect_4 27 149 IPR001480 -
Psa5g0966 805 SUPERFAMILY Protein kinase-like (PK-like) 494 789 IPR011009 -
Psa5g0966 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Psa5g0966 805 ProSiteProfiles EGF-like domain profile. 281 318 IPR000742 -
Psa5g0966 805 SMART serkin_6 516 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0966 805 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 6 791 - -
Psa5g0966 805 Gene3D - 17 147 IPR036426 -
Psa5g0966 805 Pfam D-mannose binding lectin 75 163 IPR001480 -
Psa5g0966 805 Pfam Protein kinase domain 519 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0966 805 PIRSF SRK 1 805 IPR024171 GO:0004674
Psa5g0966 805 Pfam S-locus glycoprotein domain 231 315 IPR000858 GO:0048544
Psa5g0966 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 206 IPR036426 -
Psa5g0966 805 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Psa5g0966 805 CDD PAN_AP_plant 328 417 - -
Psa5g0966 805 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 791 - -
Psa5g0966 805 ProSiteProfiles Bulb-type lectin domain profile. 15 147 IPR001480 -
Psa5g0966 805 SMART ntp_6 334 416 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0966 Psa-Chr5 73136172 73138920 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0966 471 805 Receptor kinase-like Gene Family AT5G45780 38.968 3.08e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa5g0966 Pkinase 6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0966 - - gmx:100792388 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0966 5 73136172 73138920 Psa5g0966 5 73136172 73138920 ECH