Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0952 ATGACTATCAAGACACACTGCTCTCTTCTCCCACCAATGAACTCTACAACAACCTTCCTCCTTCTAACAGCCTCACTACTCCTGCTAACATGCGCTACTCACGTCCTCTCCGCCACCCCATGCCCACCCTGCGGCAACACCACCGTACCTTTTCCACTCAGCACCACCACCACATGCGGTGACCCGTTATATAAAGTCCGCTGCACCTCTTCCGGTTCACTGGTTTTCGACACACTAAATAACACCTACCCTATCGAATCCATTAACCCACGAACCCAACGGTTCGTGATCCAACCCGCTCCACTCATCCCCAACACATGCACTTCCACCGATAAAGTCCACCAAGGAATCCAACTCAATAACAGTCTTCCCTTCAACATCACGAGCTCCAACACCATCGTTTACCTCAACTGCACACGCACGCTTCTACAATCGCCGCTCAACTGCTCCGCCGCTAGCGCTTGCCACGCTTACATCAACGCCACCGCTTCTGTTTCCGCCTGCCAGACCGGTCCGCTCTGCTGCACGTACCGGACCGGTGGTTCGAGTAACTCTTACATGATCCGTGTTAGAGACTCGGGTTGTAGCGCTTACTCTAGTTTTGTGAACCTTGACACGAGTCTTTCTGTGAACCGGTGGTCTAGACCCGGTTTGGAGATTCAGTGGATGTCGCCTAGAGAAACCGTTTGTGGGTCCCAGAAAGATTGTGATGCTGCCACGTCGACTTGTGGGGTTGATGCTTCATCGGCTAATGGGATCAAGAGGTGTTTCTGTAATGGAGAGCTTGTGTGGGACCCTGTTCAAGGGGTGTGTACTAAAAAAATTACTTGCTTCAACCCTGATGGCTGTGACGATTCCAACAATAAGACAGCTATAATAGCAGGTGCAACATGTGGAGTTGGAGCTGCACTCATCCTAGCAACAATTGTCATTCTTCTCTACAAACGCCACAAACGCATATTAGAAGCACAACAACGCCTAGCCAAAGAGCGTGAAGGAATTCTAAACGCAAGTGGTGGAGGAAAAGCAGCCAAACTTTTCTCCGGCAAAGAGATTAAAAAGGCCACAAACGACTTCTCCGCCGACCGACTCCTTGGCGTTGGCGGCTACGGTGAAGTCTACAAAGGCATTCTTCAAGACGGAACAAACGTAGCTGTTAAATGTGCTAAGCTTGGAAACCCAAAAGGAACCGACCAAGTCCTTAATGAAGTTCGCATATTATGCCAAGTGAACCACAGAAACCTCGTTGGATTACTAGGTTGTTGTGTGGAATTGGAACAACCGATATTGGTTTATGAGTTCATAGAAAATGGAACACTTCTTGATCATTTAACAGGTCAAATGCCAAAGGGCCGTGCATCACTTAATTGGAGCCATCGTCTTCGCGTTGCTCGCGACACTTCCGAAGGTCTTGCTTACCTTCACTTCATGGCAGTGCCACCTATTTACCATAGAGATGTTAAGTCAAGTAACATTCTTCTAGACTTCAAGATGAATGCAAAGGTTTCAGATTTCGGGTTATCACGGTTGGCTCAAACGGATATGAGTCATATCTCAACCTGTGCTCAAGGGACACTTGGGTATCTCGATCCTGAGTATTATAGAAACTATCAACTAACTGATAAAAGTGATGTTTATAGTTTCGGAGTCGTGTTGCTCGAGCTTCTGACGTCTCAGAAGGCGATAGACTTTAACCGGGCTTCTGATGATGTGAACTTAGCAGTTTATGTGCAAAGGATGATGGATGAAGAGAAAGTTTTTGAAGTTATTGATCCTGTTTTGAAGAACGGAGCTAGTAATATAGAGCTTGATACGATGAAGGCATTGGCATTTTTGGCTTTGGGTTGTTTGGAGGAGAAGAGACAGAATCGACCTTCGATGAAAGAGGTGTCCGAGGAGATTGAGTATATCATTAGTATTGCATCTGCAAAAGGAGTGAAGTAG 1944 0.4697 MTIKTHCSLLPPMNSTTTFLLLTASLLLLTCATHVLSATPCPPCGNTTVPFPLSTTTTCGDPLYKVRCTSSGSLVFDTLNNTYPIESINPRTQRFVIQPAPLIPNTCTSTDKVHQGIQLNNSLPFNITSSNTIVYLNCTRTLLQSPLNCSAASACHAYINATASVSACQTGPLCCTYRTGGSSNSYMIRVRDSGCSAYSSFVNLDTSLSVNRWSRPGLEIQWMSPRETVCGSQKDCDAATSTCGVDASSANGIKRCFCNGELVWDPVQGVCTKKITCFNPDGCDDSNNKTAIIAGATCGVGAALILATIVILLYKRHKRILEAQQRLAKEREGILNASGGGKAAKLFSGKEIKKATNDFSADRLLGVGGYGEVYKGILQDGTNVAVKCAKLGNPKGTDQVLNEVRILCQVNHRNLVGLLGCCVELEQPILVYEFIENGTLLDHLTGQMPKGRASLNWSHRLRVARDTSEGLAYLHFMAVPPIYHRDVKSSNILLDFKMNAKVSDFGLSRLAQTDMSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFNRASDDVNLAVYVQRMMDEEKVFEVIDPVLKNGASNIELDTMKALAFLALGCLEEKRQNRPSMKEVSEEIEYIISIASAKGVK* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0952 647 Gene3D Transferase(Phosphotransferase) domain 1 435 644 - -
Psa5g0952 647 Pfam Protein tyrosine and serine/threonine kinase 362 633 IPR001245 GO:0004672|GO:0006468
Psa5g0952 647 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 643 IPR045274 GO:0007166
Psa5g0952 647 SMART serkin_6 359 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0952 647 PANTHER OS05G0318100 PROTEIN 30 643 - -
Psa5g0952 647 ProSiteProfiles Protein kinase domain profile. 359 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0952 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Psa5g0952 647 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Psa5g0952 647 CDD STKc_IRAK 365 635 - -
Psa5g0952 647 Gene3D Phosphorylase Kinase; domain 1 320 434 - -
Psa5g0952 647 SUPERFAMILY Protein kinase-like (PK-like) 344 633 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0952 Psa-Chr5 72819094 72822542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0952 30 644 Receptor kinase-like Gene Family AT5G02070 52.283 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Psa5g0952 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0952 - - gmx:100305415 1075.08