Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g0952 | ATGACTATCAAGACACACTGCTCTCTTCTCCCACCAATGAACTCTACAACAACCTTCCTCCTTCTAACAGCCTCACTACTCCTGCTAACATGCGCTACTCACGTCCTCTCCGCCACCCCATGCCCACCCTGCGGCAACACCACCGTACCTTTTCCACTCAGCACCACCACCACATGCGGTGACCCGTTATATAAAGTCCGCTGCACCTCTTCCGGTTCACTGGTTTTCGACACACTAAATAACACCTACCCTATCGAATCCATTAACCCACGAACCCAACGGTTCGTGATCCAACCCGCTCCACTCATCCCCAACACATGCACTTCCACCGATAAAGTCCACCAAGGAATCCAACTCAATAACAGTCTTCCCTTCAACATCACGAGCTCCAACACCATCGTTTACCTCAACTGCACACGCACGCTTCTACAATCGCCGCTCAACTGCTCCGCCGCTAGCGCTTGCCACGCTTACATCAACGCCACCGCTTCTGTTTCCGCCTGCCAGACCGGTCCGCTCTGCTGCACGTACCGGACCGGTGGTTCGAGTAACTCTTACATGATCCGTGTTAGAGACTCGGGTTGTAGCGCTTACTCTAGTTTTGTGAACCTTGACACGAGTCTTTCTGTGAACCGGTGGTCTAGACCCGGTTTGGAGATTCAGTGGATGTCGCCTAGAGAAACCGTTTGTGGGTCCCAGAAAGATTGTGATGCTGCCACGTCGACTTGTGGGGTTGATGCTTCATCGGCTAATGGGATCAAGAGGTGTTTCTGTAATGGAGAGCTTGTGTGGGACCCTGTTCAAGGGGTGTGTACTAAAAAAATTACTTGCTTCAACCCTGATGGCTGTGACGATTCCAACAATAAGACAGCTATAATAGCAGGTGCAACATGTGGAGTTGGAGCTGCACTCATCCTAGCAACAATTGTCATTCTTCTCTACAAACGCCACAAACGCATATTAGAAGCACAACAACGCCTAGCCAAAGAGCGTGAAGGAATTCTAAACGCAAGTGGTGGAGGAAAAGCAGCCAAACTTTTCTCCGGCAAAGAGATTAAAAAGGCCACAAACGACTTCTCCGCCGACCGACTCCTTGGCGTTGGCGGCTACGGTGAAGTCTACAAAGGCATTCTTCAAGACGGAACAAACGTAGCTGTTAAATGTGCTAAGCTTGGAAACCCAAAAGGAACCGACCAAGTCCTTAATGAAGTTCGCATATTATGCCAAGTGAACCACAGAAACCTCGTTGGATTACTAGGTTGTTGTGTGGAATTGGAACAACCGATATTGGTTTATGAGTTCATAGAAAATGGAACACTTCTTGATCATTTAACAGGTCAAATGCCAAAGGGCCGTGCATCACTTAATTGGAGCCATCGTCTTCGCGTTGCTCGCGACACTTCCGAAGGTCTTGCTTACCTTCACTTCATGGCAGTGCCACCTATTTACCATAGAGATGTTAAGTCAAGTAACATTCTTCTAGACTTCAAGATGAATGCAAAGGTTTCAGATTTCGGGTTATCACGGTTGGCTCAAACGGATATGAGTCATATCTCAACCTGTGCTCAAGGGACACTTGGGTATCTCGATCCTGAGTATTATAGAAACTATCAACTAACTGATAAAAGTGATGTTTATAGTTTCGGAGTCGTGTTGCTCGAGCTTCTGACGTCTCAGAAGGCGATAGACTTTAACCGGGCTTCTGATGATGTGAACTTAGCAGTTTATGTGCAAAGGATGATGGATGAAGAGAAAGTTTTTGAAGTTATTGATCCTGTTTTGAAGAACGGAGCTAGTAATATAGAGCTTGATACGATGAAGGCATTGGCATTTTTGGCTTTGGGTTGTTTGGAGGAGAAGAGACAGAATCGACCTTCGATGAAAGAGGTGTCCGAGGAGATTGAGTATATCATTAGTATTGCATCTGCAAAAGGAGTGAAGTAG | 1944 | 0.4697 | MTIKTHCSLLPPMNSTTTFLLLTASLLLLTCATHVLSATPCPPCGNTTVPFPLSTTTTCGDPLYKVRCTSSGSLVFDTLNNTYPIESINPRTQRFVIQPAPLIPNTCTSTDKVHQGIQLNNSLPFNITSSNTIVYLNCTRTLLQSPLNCSAASACHAYINATASVSACQTGPLCCTYRTGGSSNSYMIRVRDSGCSAYSSFVNLDTSLSVNRWSRPGLEIQWMSPRETVCGSQKDCDAATSTCGVDASSANGIKRCFCNGELVWDPVQGVCTKKITCFNPDGCDDSNNKTAIIAGATCGVGAALILATIVILLYKRHKRILEAQQRLAKEREGILNASGGGKAAKLFSGKEIKKATNDFSADRLLGVGGYGEVYKGILQDGTNVAVKCAKLGNPKGTDQVLNEVRILCQVNHRNLVGLLGCCVELEQPILVYEFIENGTLLDHLTGQMPKGRASLNWSHRLRVARDTSEGLAYLHFMAVPPIYHRDVKSSNILLDFKMNAKVSDFGLSRLAQTDMSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFNRASDDVNLAVYVQRMMDEEKVFEVIDPVLKNGASNIELDTMKALAFLALGCLEEKRQNRPSMKEVSEEIEYIISIASAKGVK* | 648 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g0952 | 647 | Gene3D | Transferase(Phosphotransferase) domain 1 | 435 | 644 | - | - | |
Psa5g0952 | 647 | Pfam | Protein tyrosine and serine/threonine kinase | 362 | 633 | IPR001245 | GO:0004672|GO:0006468 | |
Psa5g0952 | 647 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 30 | 643 | IPR045274 | GO:0007166 | |
Psa5g0952 | 647 | SMART | serkin_6 | 359 | 637 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa5g0952 | 647 | PANTHER | OS05G0318100 PROTEIN | 30 | 643 | - | - | |
Psa5g0952 | 647 | ProSiteProfiles | Protein kinase domain profile. | 359 | 637 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa5g0952 | 647 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 482 | 494 | IPR008271 | GO:0004672|GO:0006468 | |
Psa5g0952 | 647 | ProSitePatterns | Protein kinases ATP-binding region signature. | 365 | 387 | IPR017441 | GO:0005524 | |
Psa5g0952 | 647 | CDD | STKc_IRAK | 365 | 635 | - | - | |
Psa5g0952 | 647 | Gene3D | Phosphorylase Kinase; domain 1 | 320 | 434 | - | - | |
Psa5g0952 | 647 | SUPERFAMILY | Protein kinase-like (PK-like) | 344 | 633 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g0952 | Psa-Chr5 | 72819094 | 72822542 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g0952 | 30 | 644 | Receptor kinase-like Gene Family | AT5G02070 | 52.283 | 0.0 | 636 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Psa5g0952 | PK_Tyr_Ser-Thr | 2.5e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g0952 | - | - | gmx:100305415 | 1075.08 |