Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0947 ATGCATTTGATCCTTCTCTCCTTGCTTTTGTTTCTAATACTTTCATCATCTTCAGCATTGGATACCATGAAGCAAGGTTCATCCCTCTCAGTGGAAGAACCAAAAGATATCATAGTATCACAAAATGGAATGTTCTGTGCTGGTTTCTATGCTGTTGGTGAAAATGCATATTCCTTTGCCATTTGGTTTTCCGAACCAAATCCCCAAACACAAAACCTTACCTTAGTATGGAATGCAAACCGCGACCAACCCGTCAACGGAAGAGGCTCAAAACTTCACCTTCTCAACAATGGTAACCTTGTCTTAAGAGATACCGATGAGTCTCACGTTTGGTCCGCAAACACCGTCTCACTCTCTTCTGTTGATCTCGTTCTTTTAAACACTGGTAACCTCGTTTTACGCGAAGTAAACGGTGTTACTTTGTGGCAAAGCTTTGATTCTCCTACTGATACGCTTCTGCCACAACAAGTTTTCAACAGACAATCAAGAATAGTTTGTTCAAGAAGTGAAACAAACAAGTCATCTGGTTTTTATATGTTGTATTTTGACAACGACAACATTCTTCGTCTTCTTTACGACGGTCCTGAAGTATCGAGCATTTATTGGCCGGATCCTTGGCTTACTGATTGGGATGCTAAAAGGGCTGGTTACAATAACAGTAAAGTTGCGGTTTTGAATACTCTCGGTAACTTTAGTTCATCAGATAATTTCAATTTCATGACATCTGATTATGGAGATGCACTGATGCAGAGAAGACTTAGACTTGATCCTGACGGAAACATTCGCACTTACAGTCGAAAACAAAGTGGAAAAAATTGGTATATTTCATGGCAAGCCAAATCAAGACCATGTAGAATTCATGGTGTTTGTGGTGTAAATAGTTTGTGCTCTTATTATAGTGACAGTGTGAAATGTTCTTGTCTTCCGGGATATAAAATGAAGAATCCTCAAGATTGGGCTTATGGATGTCAACCAGAATTCTCTCTGCCATGCAACAAAACTCAATCTCAGTTTCTAGTTATATCCAATGTGGAGTTGTTTGGTTATGATTATGGAATCTTTGTAAATTACACACTTGCTCGGTGCAAAGATTTATGTTTACAATTATGCAATTGCAAAGGTATTCAATATACCTATGTCAAAGCGGGTAGTGGCATACCTGATACTTATACATGTTACCCGAAGCTACAGCTGCGAAACGCGTATCGAATACCATATTTCAACGCTGATTTGTACTTGAAACTGCCGGCAAACAGTTCATACACTTACAAAGAATCAATGAATGATAAGTACAAACTCGCTTGTCCTGCGAGTCCGAAAACAACAACTCTTGAAAGATTATATAATGAAGTTCGTGAAGGAAGGTATATTAGGTTTTTGCTCTTGTTTGTAGGGGGAATGGGAGGAGTAGAAATCTTGTGCATATTTTTTATGTGGTTTTTCTTTATAAGATCAAAAAATAATTTAGACACAAGAGTGTATAACAATATGTCCATAATTGGTTTTAGAAAATTCAGTTATTCTGAATTGAAAAAAGCAACAAAAAATTTTAGTCAAGAGATTGGAAAAGGTGCAGGAGGGGTTGTATACAAAGGTGTACTGTTAGATGAACGAGTTATAGCGGTGAAGAGACTCATTGAGGCTAATCAAGGCGAAGCACAGTTTCTCGCGGAAGTAAGTAGCATTGGAAGGCTTAACCATATGAATTTGATTGAATTATGGGGTTATTGTGCAGAAGGAAAACACAGAATGCTTGTGTATGAGTTCATGGAAAATGGTTCTTTAGCAGAACATTTAAGGTCTAGTGGATTGGATTGGACAAAGAGATTTGACATAGCTTTAGGTACAGCAAAAGGTTTGGCTTATATTCATGAAGAGTGTTTGGAGTGGATTTTGCATTGTGATGTGAAGCCACAGAACATACTTTTGGATTCTGATTATCAACCAAAGGTGGCAGATTTTGGACTGTCAAAGCTAAGAGACAGAAGTGATGCTAAATTCTCTAGTTTTTCGAAAATACGAGGAACAAGAGGTTATATGGCTCCTGAGTGGATATTGAATCATTCAATAACATCTAAAATAGATGTTTATAGCTATGGAATGGTTGTGTTGGAAATAATAACAGGAAAGAGTGCAACAAAGGATGTTGATATGGGAGATGGAGAAGAGAAACAAGGTTTGGTTGCATGGTTGAGAGAGAAAAGATATACAAGAAGTGCATGGGTTAATGAAATCATAGACCCTACCATTGAAGGAGGTTATGATGAAAGGGAAGTTGAAGCTTTGGCTGAAGTGGCTTTGCAATGTGTAGAGGAAGATAAGGACAAAAGACCTACCATGAGTCATGTGGTGGAAGTGCTTCTGAAATTGAGTTGTGAAAATGATAATCAGGAATTAACAAGAAGCTAG 2409 0.3786 MHLILLSLLLFLILSSSSALDTMKQGSSLSVEEPKDIIVSQNGMFCAGFYAVGENAYSFAIWFSEPNPQTQNLTLVWNANRDQPVNGRGSKLHLLNNGNLVLRDTDESHVWSANTVSLSSVDLVLLNTGNLVLREVNGVTLWQSFDSPTDTLLPQQVFNRQSRIVCSRSETNKSSGFYMLYFDNDNILRLLYDGPEVSSIYWPDPWLTDWDAKRAGYNNSKVAVLNTLGNFSSSDNFNFMTSDYGDALMQRRLRLDPDGNIRTYSRKQSGKNWYISWQAKSRPCRIHGVCGVNSLCSYYSDSVKCSCLPGYKMKNPQDWAYGCQPEFSLPCNKTQSQFLVISNVELFGYDYGIFVNYTLARCKDLCLQLCNCKGIQYTYVKAGSGIPDTYTCYPKLQLRNAYRIPYFNADLYLKLPANSSYTYKESMNDKYKLACPASPKTTTLERLYNEVREGRYIRFLLLFVGGMGGVEILCIFFMWFFFIRSKNNLDTRVYNNMSIIGFRKFSYSELKKATKNFSQEIGKGAGGVVYKGVLLDERVIAVKRLIEANQGEAQFLAEVSSIGRLNHMNLIELWGYCAEGKHRMLVYEFMENGSLAEHLRSSGLDWTKRFDIALGTAKGLAYIHEECLEWILHCDVKPQNILLDSDYQPKVADFGLSKLRDRSDAKFSSFSKIRGTRGYMAPEWILNHSITSKIDVYSYGMVVLEIITGKSATKDVDMGDGEEKQGLVAWLREKRYTRSAWVNEIIDPTIEGGYDEREVEALAEVALQCVEEDKDKRPTMSHVVEVLLKLSCENDNQELTRS* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0947 802 Gene3D - 16 146 IPR036426 -
Psa5g0947 802 ProSiteProfiles Bulb-type lectin domain profile. 14 146 IPR001480 -
Psa5g0947 802 CDD PAN_AP_plant 327 416 - -
Psa5g0947 802 SUPERFAMILY Protein kinase-like (PK-like) 493 787 IPR011009 -
Psa5g0947 802 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 3 789 - -
Psa5g0947 802 Pfam S-locus glycoprotein domain 230 314 IPR000858 GO:0048544
Psa5g0947 802 PIRSF SRK 1 801 IPR024171 GO:0004674
Psa5g0947 802 SMART blect_4 26 148 IPR001480 -
Psa5g0947 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Psa5g0947 802 CDD STKc_IRAK 521 790 - -
Psa5g0947 802 ProSiteProfiles EGF-like domain profile. 280 317 IPR000742 -
Psa5g0947 802 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Psa5g0947 802 SMART serkin_6 515 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0947 802 ProSiteProfiles Protein kinase domain profile. 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0947 802 Pfam Protein kinase domain 518 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0947 802 PANTHER OS07G0415500 PROTEIN 3 789 - -
Psa5g0947 802 Gene3D - 147 274 IPR036426 -
Psa5g0947 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 205 IPR036426 -
Psa5g0947 802 Gene3D Transferase(Phosphotransferase) domain 1 590 801 - -
Psa5g0947 802 ProSiteProfiles PAN/Apple domain profile. 331 416 IPR003609 -
Psa5g0947 802 Gene3D Phosphorylase Kinase; domain 1 482 589 - -
Psa5g0947 802 CDD B_lectin 38 148 IPR001480 -
Psa5g0947 802 SMART ntp_6 333 415 IPR003609 -
Psa5g0947 802 Pfam D-mannose binding lectin 74 163 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0947 Psa-Chr5 72656356 72658903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0947 455 793 Receptor kinase-like Gene Family AT5G45780 38.095 2.00e-68 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa5g0947 Pkinase 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0947 - - gmx:100792388 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0947 5 72656356 72658903 Psa5g0947 5 72656356 72658903 ECH