Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0928 ATGAGTGGTCCGTCGCGAGAAGAGGATTCAAAGGTGGAGGAGAGAGAACATAAGGAAGGAGAAGGTAACCGGTTACTGGAACTAGAAGGTGAATCGGAGACGGAGGAGGAGGATGAAGCGGCGTATGAATCCGGCGAGAAAATCGTGGTGGTGGATTTCGAATTTGATTCCGTGGATGATTCAGCGGTTCCTCCTTTTTCATGGAAGAAGCTATGGATGTTCACTGGACCTGGATTCTTGATGAGTATAGCTTTTTTGGATCCGGGGAATCTGGAAGGGGATCTGCAGGCCGGAGCGATTGCCGGATATTCGCTGTTGTGGTTGTTGATGTGGGCTACTTTCATGGGGTTGTTGATTCAGCTTCTTTCTGCGAGAGTTGGTGTTGCTACTGGTCGTCATCTTGCTGAGCTTTGTAGGGAGGAGTACCCTAATTGGGCTCGTTACGTGCTTTGGTTTATGGCGGAATTGGCTTTGATTGGGGCTGATATTCAAGAGGTTATTGGGAGTGCGATTGCTATTCAGATTCTTAGCCGTGGTGTTTTGCCTCTTTGGGCTGGTGTTCTTATCACTGCTTCTGATTGCTTTTTCTTTCTATTTCTTGAGAACTACGGAGTAAGGAAGTTGGAAGCTGCTTTTGCAGTTCTAATTGCTACCATGGCTGTTTCTTTTGCCTGGATGTTTGGTGACACAAAACCTAGTGGAAAAGAGCTCTTGATGGGTATTTTGATTCCAAGACTTAGCTCAAAAACAATTCGTCAGGCTGTGGGCGTTGTGGGATGTGTCATTATGCCTCACAATGTATTTCTGCATTCTGCTTTAGTTCAGTCAAGGAAGATTGATCCACTTAAGAAAGGCCGGGTGCAAGAGGCTCTTAATTACTATAATATTGAGTCAACGGTTGCACTTTCAGTCACCTTCATGATTAATCTATTTGTCACGACAGTTTTTGCCAAGGGTTTCTATGGTACAAAGCAGGCAAATAGCATAGGATTGGTGAATGCAGGGCAGTATCTTGAGGAAAAATATGGAGGAGGTCTCTTCCCTATTCTTTATATATGGGGAATTGGGTTATTGGCGGCTGGACAAAGTAGCACTATCACTGGCACGTATGCGGGGCAATTCATAATGGGGGGTTTCCTCAACCTTCGATTAAAGAAATGGTTGAGAGCATTGATCACCCGGAGTTGTGCAATCGTGCCAACTATAATTGTAGCTATTGTTTATAACAGCTCAGAAGCCTCATTGGATGTTTTGAATGAATGGCTTAATGTACTTCAGTCCGTACAAATTCCCTTTGCATTGATTCCCCTCCTCACGTTGGTCTCCAAAGAGCGTATCATGGGGTCCTTTAAGATTGGGCCTGTTCTTGAGGTGAGTTGA 1380 0.4493 MSGPSREEDSKVEEREHKEGEGNRLLELEGESETEEEDEAAYESGEKIVVVDFEFDSVDDSAVPPFSWKKLWMFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCREEYPNWARYVLWFMAELALIGADIQEVIGSAIAIQILSRGVLPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIATMAVSFAWMFGDTKPSGKELLMGILIPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPLKKGRVQEALNYYNIESTVALSVTFMINLFVTTVFAKGFYGTKQANSIGLVNAGQYLEEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAIVPTIIVAIVYNSSEASLDVLNEWLNVLQSVQIPFALIPLLTLVSKERIMGSFKIGPVLEVS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0928 459 PANTHER BNAC08G04640D PROTEIN 30 457 - -
Psa5g0928 459 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 30 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 Hamap Divalent metal cation transporter MntH [mntH]. 57 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 69 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 MobiDBLite consensus disorder prediction 1 43 - -
Psa5g0928 459 Pfam Natural resistance-associated macrophage protein 92 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 MobiDBLite consensus disorder prediction 1 29 - -
Psa5g0928 459 PRINTS Natural resistance-associated macrophage protein signature 150 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 PRINTS Natural resistance-associated macrophage protein signature 180 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 PRINTS Natural resistance-associated macrophage protein signature 205 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 PRINTS Natural resistance-associated macrophage protein signature 254 277 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 PRINTS Natural resistance-associated macrophage protein signature 361 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 PRINTS Natural resistance-associated macrophage protein signature 389 406 IPR001046 GO:0016020|GO:0030001|GO:0046873
Psa5g0928 459 PRINTS Natural resistance-associated macrophage protein signature 423 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0928 Psa-Chr5 71425740 71431523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0928 7 457 Inorganic Solute Cotransporters AT1G47240 81.978 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0928 K21398 - gmx:100795013 765.763