Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g0909 | ATGTCTTTACGATCAGAAGCTCCTGATATCAATATTGAAGCTGAATATTGTCCTGAAGCTGTGATTGAATGGTACCGTTTAACAAGACAAAAAGATGGTAAAAAAGTTGTTGGTAGAATGGTTTTGAGTTTGAAAGCAAAACAACATCTTGTTTTTTTGGGTTGGAAGCTTTGGTATGTCGACAAAAAATGTAAATGGGAATTGCGTTATACTTGTCCTACCACTGGAAAACATTATATCACTCTTAAGAATGCATGTGAAAGGTGTATTCAAGATGGAAGTTGTTCCATCAAACCGATGAAGTCAAACAAACGATTGAGAGATTCTAAAGAATATGATCAATCAAGTTCAAGTTCTAGTTCTGATGATGATTCTGATGTTAGTGACACTATAACTTCAACTTCAAAGGAAAATGAGAAATGTTCGAGTCGATGTGAGTCGGGATCGGAAGTTACTAATTCTATGCAGAGTGATAGAATAGGAAAGGTATTAAAGATGAGTGCAATGGAGAATTTTTCAGAAGGTTGTAACAAAAGAGGGGAGGTAATGAATGTGAGTACAAGGAAAAGGTGTACTCTTCTTTATTGGTTGATAGATAATCGAGTGTTGGCTTCGGGGACTAGTGTGTTATGTCGTGGTGGTAATGATATTGTCAAAAAAGGGAATATATTTTGTGATGGTATAGTTTGTGATTGTTGTCGTGATAATTTCACTATGACTGCATTTGAGGCGCATGCTTGTTGTACAAGACGTAGACCATCCACTAGTATCTGTTTAGAAGACGGGAGGTCGTTGTTCGAATGTCAAAGAGAAGCTCTGAGTTCATGTGGTAAAGAGGGGAGTCATTTTGTTGGCGAAGAAAAGATGGAAAAATATAATGATGTTGTTTGTTTAGTTTGTGGTTTAGGAGGTGAGATAATACTATGTGATCAATGTCCTTCTTCGTTTCATCTTGGTTGTTTAGGTCTTGATCGAGTTCCCGATGGTGATTGGTTTTGTCCAACTTGTTGTTGCAAAATATGTCATCAACCTAAATGCAAACATGAAGAATGTGAAGATGAAGAGGATAATGACATTATTGTTATTTGTGTTCAATGTGAGCAAAAATTTCACTCTGGATGCTTAAAGACGATAGGAATTGGTGGCGTGGAGAGCAACGCTAAAAAGAAGAATTGGTTTTGTAGCGTAGTTTGTGGGAAAATGTTCTTGTGTCTAAAAAACATGTTAGGAAAATCGATCAAGGTTGCAAATGATCTAACTTGGACATTGTTTAAGAATGTGAGTAACAGTGATGATGATGGAGATTTTACTTCGGACGAGTTTAGTCAAAATAAGAGTAAGTTGAATGCGATTTTTGGTGTATTGCAAGAGAGTTTCGACCCGATTGTTGATGTTATAACCAAAAGAGAATTGATTGAAGATGTTGTTTTTAGTAGATACTCAGAACATAATCGTTCTAACTTCAGTGGTTTCTATAATGTGATTTTAGAAAAAATGGCTGAAGTGGTTTCTGTGGCAACTATAAGAATTTATGGTCCAAAGGTTGCGGAAATAGTTTTTGTGGCTACCAAAAAACAATATCGAAGACAAGGAATGTGTTGGTTGTTGATGGATGAGCTTGAGAAACACATGACCAACTTAGAAATAAGGAGTTTGATTTTGCATTCCTCTAAAAGTACTATAAACACTTGGACAAAATCATTTGGGTTTGCAATAATGTCGGCTAAGGATAAGTCTCAATTTATTAATCATACACTTCTAGAATTTCAGAATACTATCATGTGTCTTAAATTACTTAATAAATCACTTAATAGACGAATATGA | 1824 | 0.3536 | MSLRSEAPDINIEAEYCPEAVIEWYRLTRQKDGKKVVGRMVLSLKAKQHLVFLGWKLWYVDKKCKWELRYTCPTTGKHYITLKNACERCIQDGSCSIKPMKSNKRLRDSKEYDQSSSSSSSDDDSDVSDTITSTSKENEKCSSRCESGSEVTNSMQSDRIGKVLKMSAMENFSEGCNKRGEVMNVSTRKRCTLLYWLIDNRVLASGTSVLCRGGNDIVKKGNIFCDGIVCDCCRDNFTMTAFEAHACCTRRRPSTSICLEDGRSLFECQREALSSCGKEGSHFVGEEKMEKYNDVVCLVCGLGGEIILCDQCPSSFHLGCLGLDRVPDGDWFCPTCCCKICHQPKCKHEECEDEEDNDIIVICVQCEQKFHSGCLKTIGIGGVESNAKKKNWFCSVVCGKMFLCLKNMLGKSIKVANDLTWTLFKNVSNSDDDGDFTSDEFSQNKSKLNAIFGVLQESFDPIVDVITKRELIEDVVFSRYSEHNRSNFSGFYNVILEKMAEVVSVATIRIYGPKVAEIVFVATKKQYRRQGMCWLLMDELEKHMTNLEIRSLILHSSKSTINTWTKSFGFAIMSAKDKSQFINHTLLEFQNTIMCLKLLNKSLNRRI* | 608 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g0909 | 607 | PANTHER | DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED | 8 | 601 | - | - | |
Psa5g0909 | 607 | Pfam | Tify domain binding domain | 221 | 272 | IPR032308 | - | |
Psa5g0909 | 607 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 448 | 584 | IPR016181 | - | |
Psa5g0909 | 607 | SMART | PHD_3 | 338 | 398 | IPR001965 | - | |
Psa5g0909 | 607 | SMART | PHD_3 | 296 | 337 | IPR001965 | - | |
Psa5g0909 | 607 | ProSiteProfiles | Zinc finger PHD-type profile. | 294 | 339 | IPR019787 | - | |
Psa5g0909 | 607 | MobiDBLite | consensus disorder prediction | 106 | 156 | - | - | |
Psa5g0909 | 607 | PANTHER | AGENET DOMAIN-CONTAINING PROTEIN-RELATED | 8 | 601 | - | - | |
Psa5g0909 | 607 | CDD | NAT_SF | 494 | 555 | - | - | |
Psa5g0909 | 607 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 284 | 359 | IPR013083 | - | |
Psa5g0909 | 607 | Pfam | PHD-finger | 297 | 338 | IPR019787 | - | |
Psa5g0909 | 607 | MobiDBLite | consensus disorder prediction | 113 | 138 | - | - | |
Psa5g0909 | 607 | Pfam | Acetyltransferase (GNAT) family | 476 | 570 | IPR000182 | GO:0016407 | |
Psa5g0909 | 607 | ProSitePatterns | Zinc finger PHD-type signature. | 297 | 336 | IPR019786 | - | |
Psa5g0909 | 607 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 439 | 592 | IPR000182 | GO:0016407 | |
Psa5g0909 | 607 | Gene3D | - | 430 | 602 | - | - | |
Psa5g0909 | 607 | SUPERFAMILY | FYVE/PHD zinc finger | 286 | 338 | IPR011011 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g0909 | Psa-Chr5 | 70062871 | 70064784 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g0909 | 193 | 542 | PHD Transcription Factor Family | AT5G58610 | 41.408 | 3.25e-78 | 265 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Psa5g0909 | Acetyltransf_1 | 4e-08 | CL0257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g0909 | - | - | cam:101509959 | 717.613 |