Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0904 ATGTCGAATTTGCCCCATTATCTGTCTGTGAACTCTGCATTCGGCGTTGGTGCTACTGCTATTTCTCATTCTTCCGTTGCTAGCTCTCAATCTTCCGCCGGAAACAGGGATCGTAACATGGCTTCTTCTGAACAACTCGTTCTCGAGCTCAGCAACCCAGAGCTTCGTGAAAATGCTCTTCTCGAACTCTCTAAGAAGAGAGAGCAATTTCAAGATCTTGCTCCCTTGCTATGGAATTCATTTGGTACTATTGCAGCACTTTTACAGGAAATAGTATCGATATACCCAGTGCTATCACCACCCAATCTCACTCCTGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGCGTAGCATCTCACCCGGACACAAGGATGCTATTCCTCAACGCTCATATTCCATTGTATCTGTATCCCTTCTTGAACACAACAAGTAAGTCAAGACCTTTTGAGTACTTGAGGCTTACTAGTCTTGGTGTCATTGGCGCATTGGTGAAGGTACTTTTTCCTTACTCATTCTGA 531 0.4444 MSNLPHYLSVNSAFGVGATAISHSSVASSQSSAGNRDRNMASSEQLVLELSNPELRENALLELSKKREQFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVLFPYSF* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0904 176 PANTHER BNAA05G20110D PROTEIN 1 170 - -
Psa5g0904 176 Gene3D - 34 173 IPR011989 -
Psa5g0904 176 Pfam Cell differentiation family, Rcd1-like 46 169 - -
Psa5g0904 176 PANTHER UNCHARACTERIZED 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0904 Psa-Chr5 69896488 69901210 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Psa5g0904 Rcd1 3.4e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0904 K12606 - gmx:100784529 279.256