Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0890 ATGAATATGCTGATTTTCAAATGTCTTCAGATGGCTGTGCTGCTAGTTTTCTCTGGAAGATACACCATAGCAGAAAAGAAAACACAACATCCTAAAAAGACATACATAGTTCACATGGACAAGTTCAACATGCCAGCGAGTTTTGACGATCATATCCAATGGTATGATTCATCACTGAAATCAGTAACAGACACTGCAGAGATGCTGTATACCTACAAACATGTAGCTCATGGATTCTCCGCAAGGCTAACAGCTGAAGAAGCAGACTTACTCACAAAGCAACCGGGAATTCTTTCGATTGTCCCTGAAGTTAGGTACGAGCTTCACACAACTCGAACACCAGAGTTCCTTGGATTGGAGAAAACAACAGCTTTTCTAGTCTCTTCTGGGAAACAAAGCGAGGTGATTGTTGGAGTAATAGACACAGGTGTATGGCCTGAACTAAAAAGTTTCGGTGATACTGGACTTGGACCAGTACGGAGTAGCTGGAAAGGGGAATGTGAGACAGCTTTTGGACCCATTGACGAAAAGGCAGAATCAAAGTCACCAAGGGATGATGATGGACATGGAAGCCACACCTCAACTACAGCAGCAGGTTCTGCAGTTGCGGGAGCAAGCCTTTTTGGTTTTGCTTCCGGGACAGCAAAAGGCATGGCCACACAAGCTCGAGTAGCTGCTTACAAAGCGTGTTGGCTTGACCGTGATTTCCCTGCCTATATCACCCTTGGAAACGGGAAGAGATACAATGGTGTGTCTCTTTACAATGGAAAATTGCCACCTGATTCTCTACTGCCACTTGTTTATGCTGCAAACGTCAGCCTGAATTCGGATTCTAGTGATAACCTCTGTACCACAGATAGTTTGATTCCTAGTAAAGTTTCAGGAAAGATAGTGATATGTGACCGAGGAGGAAATCCTAGAGCCGAAAAGAGTTTGGTTGTCAAGCGTGCAGGAGGAATTGGGATGATTTTAGCAAACAACGAAGATTATGGGGAAGAGCTAGTTGCTGACTCCTATCTCCTCCCAGCAGCAGCTTTGGGAGAGAAAGCAAGCAGTGAAGTAAAGAAAACCTACAAAAATGGGCAAACAATAAAAGATATCGCTACTGGGATACCTGCTACGCCGTTTGACTATGGTGCTGGGCACGTGGATCCAGTAGCTGCTCTTGATCCTGGTCTTTTGTATGATACTACAACGGATGACTACCTGAGCTTCCTCTGTGCCTTGAACTACACTTCATTTCAAATTAAGCTTGTTGCAAGAAGAGAGTTCACATGTGACAAAAGGATTAAATACAGGGTGGAAGATCTCAATTACCCGTCTTTTGCTGTTCAATTTGTCTCAGCTTCAGGTGGTTCTCACAAGCCAAGCACTGTCCAGTATAAAAGGATTCTGACTAACGTAGGGACCTCATCAACATATAAAGTTTCAGTATCTTCACAGTCTCCTTTGATTAAGATTGTGGTTGAACCACAAACACTCAGTTTCAAGACATTGTACGAGAAGAAGAGCTACACTGTTACATTCACGTCTAATTCAATGTCTTCTGGTACAACCAGCTTTGCTCATCTGGAATGGTCAGATGGGAAACATAAGGTCACTAGTCCCATTGCTTTCAGCTGGACTTGA 1629 0.4365 MNMLIFKCLQMAVLLVFSGRYTIAEKKTQHPKKTYIVHMDKFNMPASFDDHIQWYDSSLKSVTDTAEMLYTYKHVAHGFSARLTAEEADLLTKQPGILSIVPEVRYELHTTRTPEFLGLEKTTAFLVSSGKQSEVIVGVIDTGVWPELKSFGDTGLGPVRSSWKGECETAFGPIDEKAESKSPRDDDGHGSHTSTTAAGSAVAGASLFGFASGTAKGMATQARVAAYKACWLDRDFPAYITLGNGKRYNGVSLYNGKLPPDSLLPLVYAANVSLNSDSSDNLCTTDSLIPSKVSGKIVICDRGGNPRAEKSLVVKRAGGIGMILANNEDYGEELVADSYLLPAAALGEKASSEVKKTYKNGQTIKDIATGIPATPFDYGAGHVDPVAALDPGLLYDTTTDDYLSFLCALNYTSFQIKLVARREFTCDKRIKYRVEDLNYPSFAVQFVSASGGSHKPSTVQYKRILTNVGTSSTYKVSVSSQSPLIKIVVEPQTLSFKTLYEKKSYTVTFTSNSMSSGTTSFAHLEWSDGKHKVTSPIAFSWT* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0890 542 Gene3D - 234 365 - -
Psa5g0890 542 SUPERFAMILY PA domain 288 379 IPR046450 -
Psa5g0890 542 SUPERFAMILY Subtilisin-like 13 231 IPR036852 GO:0004252|GO:0006508
Psa5g0890 542 CDD PA_subtilisin_like 239 366 - -
Psa5g0890 542 Pfam Fibronectin type-III domain 436 538 IPR041469 -
Psa5g0890 542 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 232 358 IPR045051 -
Psa5g0890 542 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 175 232 IPR045051 -
Psa5g0890 542 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 357 540 IPR045051 -
Psa5g0890 542 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 170 IPR045051 -
Psa5g0890 542 Pfam PA domain 265 350 IPR003137 -
Psa5g0890 542 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 22 170 - -
Psa5g0890 542 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 232 358 - -
Psa5g0890 542 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 175 232 - -
Psa5g0890 542 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 357 540 - -
Psa5g0890 542 MobiDBLite consensus disorder prediction 173 191 - -
Psa5g0890 542 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 109 IPR037045 -
Psa5g0890 542 MobiDBLite consensus disorder prediction 173 196 - -
Psa5g0890 542 Pfam Subtilase family 133 231 IPR000209 GO:0006508|GO:0008236
Psa5g0890 542 Gene3D Peptidase S8/S53 domain 369 402 IPR036852 GO:0004252|GO:0006508
Psa5g0890 542 Gene3D Peptidase S8/S53 domain 135 231 IPR036852 GO:0004252|GO:0006508
Psa5g0890 542 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Psa5g0890 542 Gene3D - 406 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0890 Psa-Chr5 69693530 69695833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0890 356 542 Subtilisin-like Serine Gene Family AT5G67360 57.979 9.85e-62 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0890 - - egt:105974968 364.77