Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0883 GTGAATGAAGCAGTTGTTACAGGTTGGCTCTTCTTTCGATATTTGGTAATTGGAGCTTATGTTGGCCTTGCCACTGTTGCCGGTTTTATTTGGTGGTTTGTTTACGCCGATAGTGGCCCTAAACTACCATACACTGAATTGATGAATTTTGACACTTGCTCGACCAGGGAGACAACTTATCCGTGCAGTATATTTGAAGATCGACACCCATCCACTGTATCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTCTGAACAATCTTAGTGAAAATCAATCCCTCCTGGCCATCCCTCCCTGGAGTAACATGTGGCTTGTTGGTTCTATAGTCCTAACTATACTTCTTCATACACTAATTCTGTACGTTCACCCATTATCAGTTCTTTTCTCTGTAACACCATTGTCTTGGGCTGACTGGATGGCTGTCCTCTATCTTTCTCTACCGGTTATAATCATTGATGAGATCCTGAAGTTCTTTTCCAGAAATCCCAATG 499 0.4228 VNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYADSGPKLPYTELMNFDTCSTRETTYPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLAIPPWSNMWLVGSIVLTILLHTLILYVHPLSVLFSVTPLSWADWMAVLYLSLPVIIIDEILKFFSRNPN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0883 166 Pfam Cation transporting ATPase, C-terminus 2 161 IPR006068 -
Psa5g0883 166 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 2 164 - -
Psa5g0883 166 PANTHER CALCIUM-TRANSPORTING ATPASE 2 164 - -
Psa5g0883 166 Gene3D - 1 165 - -
Psa5g0883 166 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 163 IPR023298 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0883 1 164 Primary Pumps ATPases(2) AT1G10130 85.976 3.42e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0883 K05853 - lja:Lj1g3v1733460.2 314.309