Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0848 ATGAATTCGTGGAAAGAAGAAAAAAAGGTTGCGGCGAATCGAAGCACGAGTTGCGAGGATGAAGAAAAAAGGTTGAAATTGAAGCGAAATTCATCTCGGCTCAGCAATTTTCAACGCGATCTTATGGCTGGTGCGTTGATGGGTGGTGCGGTTCATACACTTGTGGCCCCAATTGAGAGGGCTAAATTGTTGTTGCAGACACAGGAAAGTAACTTGGCTATTCTTGCTAATGGTAGGAGAAAATTCAAAGGCATGTTTGATTGTATACTTCGTATCGTTAAGGAAGAAGGTGTTGTCTCTTTGTGGCGTGGTAATGGTAGTAGTGTTCTTCGCTATTATCCTTCTGTTGCTCTCAATTTCTCTCTTAAGGATCTTTACAAAAGCATATTAAGGGGTGGGAACTCTAATGCTGATAATTTTTTCTCTGGTGCATCCGCTAATTTTGTTGCCGGATCTGCAGCAGGTTGTACATCACTTATCTTGGTATACCCCCTTGATATCGCACACACCCGCCTTGCCGCTGACATCGGGAAGACGGAAGCGCGCCAATTCCGAGGCATTTACCATTTCTTAGCCACAATATTTCAAAAAGATGGGGTTCGGGGGATTTACAGGGGCCTTCCTGCATCACTACATGGTATGGTGGTTCATAGAGGTCTTTACTTCGGAGGGTTTGATACCATGAAAGAGAAGTTGTCTGAAGAATCTAAACCCGAGTTGGTACTGTGGAAACGTTGGATGGTAGCTCAAGCAGTTACAACCTCAGCCGGTGTGATATCATATCCGCTAGACACAGTTCGTAGAAGGATGATGATGCAGTCTGGCATGGAACATCCGGTGTACACTAGCACACTCGACTGCTGGAGGAAAATCTATCGAACTGAGGGATTGGTTTCGTTCTACCGTGGCACGGTTTCAAATGTGTTTAGGAGCACTGGAGCTGCAGCTATCTTAGTCTTGTATGATGAGGTCAAGAAATTTATGAATTGGGGAGGATTGTGA 1002 0.4471 MNSWKEEKKVAANRSTSCEDEEKRLKLKRNSSRLSNFQRDLMAGALMGGAVHTLVAPIERAKLLLQTQESNLAILANGRRKFKGMFDCILRIVKEEGVVSLWRGNGSSVLRYYPSVALNFSLKDLYKSILRGGNSNADNFFSGASANFVAGSAAGCTSLILVYPLDIAHTRLAADIGKTEARQFRGIYHFLATIFQKDGVRGIYRGLPASLHGMVVHRGLYFGGFDTMKEKLSEESKPELVLWKRWMVAQAVTTSAGVISYPLDTVRRRMMMQSGMEHPVYTSTLDCWRKIYRTEGLVSFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWGGL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0848 333 PRINTS Adenine nucleotide translocator signature 37 49 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g0848 333 PRINTS Adenine nucleotide translocator signature 82 103 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g0848 333 PRINTS Adenine nucleotide translocator signature 115 127 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g0848 333 PRINTS Adenine nucleotide translocator signature 142 155 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g0848 333 PRINTS Adenine nucleotide translocator signature 245 261 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g0848 333 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Psa5g0848 333 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Psa5g0848 333 PRINTS Mitochondrial carrier protein signature 104 124 IPR002067 GO:0055085
Psa5g0848 333 PRINTS Mitochondrial carrier protein signature 157 175 IPR002067 GO:0055085
Psa5g0848 333 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Psa5g0848 333 PRINTS Mitochondrial carrier protein signature 249 271 IPR002067 GO:0055085
Psa5g0848 333 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 32 332 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g0848 333 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 32 332 - -
Psa5g0848 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 142 231 IPR018108 -
Psa5g0848 333 Gene3D Mitochondrial carrier domain 33 328 IPR023395 -
Psa5g0848 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 327 IPR018108 -
Psa5g0848 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 129 IPR018108 -
Psa5g0848 333 SUPERFAMILY Mitochondrial carrier 35 323 IPR023395 -
Psa5g0848 333 MobiDBLite consensus disorder prediction 1 23 - -
Psa5g0848 333 Pfam Mitochondrial carrier protein 145 234 IPR018108 -
Psa5g0848 333 Pfam Mitochondrial carrier protein 36 131 IPR018108 -
Psa5g0848 333 Pfam Mitochondrial carrier protein 242 329 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0848 Psa-Chr5 66628226 66638220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0848 37 330 Antiporters AT5G17400 37.417 5.55e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0848 K05863 - gmx:100807764 528.865